RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 C10orf105Q8TEF2 133 aa17.81■□□□□ 0.44
TOP3A-219ENST00000584887 NANOS1Q8WY41 292 aaKnown RBP17.81■□□□□ 0.44
TOP3A-219ENST00000584887 CCDC167Q9P0B6 97 aa17.81■□□□□ 0.44
TOP3A-219ENST00000584887 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.81■□□□□ 0.44
TOP3A-219ENST00000584887 FKBP7Q9Y680 259 aa17.81■□□□□ 0.44
TOP3A-219ENST00000584887 A0A1B0GWA3 101 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 M0R082 166 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 IFNA2P01563 188 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 ARAFP10398 606 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 ETS2P15036 469 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 HOXB9P17482 250 aaPredicted RBP17.8■□□□□ 0.44
TOP3A-219ENST00000584887 HTR2AP28223 471 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 PRKAR1BP31321 381 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 IDH3AP50213 366 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 NCALDP61601 193 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 ARF1P84077 181 aaKnown RBP17.8■□□□□ 0.44
TOP3A-219ENST00000584887 LOXL1Q08397 574 aaPredicted RBP17.8■□□□□ 0.44
TOP3A-219ENST00000584887 BEND6Q5SZJ8 279 aaPredicted RBP17.8■□□□□ 0.44
TOP3A-219ENST00000584887 C6orf52Q5T4I8 152 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 ANKRD16Q6P6B7 361 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 MSRB3Q8IXL7 192 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 GPR137CQ8N3F9 429 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 ZNF417Q8TAU3 575 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 SLC38A4Q969I6 547 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 SLC35B4Q969S0 331 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 SPDL1Q96EA4 605 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 C7orf26Q96N11 449 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 OXGR1Q96P68 337 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 ZNF587Q96SQ5 575 aaPredicted RBP17.8■□□□□ 0.44
TOP3A-219ENST00000584887 VRK1Q99986 396 aaPredicted RBP17.8■□□□□ 0.44
TOP3A-219ENST00000584887 EBF4Q9BQW3 602 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 KATNB1Q9BVA0 655 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 SLCO1B3Q9NPD5 702 aa17.8■□□□□ 0.44
TOP3A-219ENST00000584887 AIM2O14862 343 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 SLC43A1O75387 559 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 CECR9P0C854 216 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 GRPRP30550 384 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 SERPINF1P36955 418 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 SH3BGRP55822 239 aaPredicted RBP17.79■□□□□ 0.44
TOP3A-219ENST00000584887 CDK6Q00534 326 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 ALG10BQ5I7T1 473 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 REEP3Q6NUK4 255 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 BLOC1S3Q6QNY0 202 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 C6orf89Q6UWU4 347 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 COMTD1Q86VU5 262 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 FUNDC1Q8IVP5 155 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 TAAR8Q969N4 342 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 SORCS2Q96PQ0 1159 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 KCNK17Q96T54 332 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 SPATA5L1Q9BVQ7 753 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 PRR14Q9BWN1 585 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 LINC00470Q9BZP3 86 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 SEC61A2Q9H9S3 476 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 CA10Q9NS85 328 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 SELENONQ9NZV5 590 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 SLAMF8Q9P0V8 285 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 SLC13A4Q9UKG4 626 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 RCE1Q9Y256 329 aa17.79■□□□□ 0.44
TOP3A-219ENST00000584887 DNHD1Q96M86 4753 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 ARPC4-TTLL3A0A0A6YYG9 625 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 RNF212BA8MTL3 300 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 TGDSO95455 350 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 ZNF16P17020 682 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-219ENST00000584887 USF1P22415 310 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-219ENST00000584887 PPIBP23284 216 aaKnown RBP17.78■□□□□ 0.44
TOP3A-219ENST00000584887 AQP1P29972 269 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 CAPZA2P47755 286 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 PDLIM4P50479 330 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 IDH3GP51553 393 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-219ENST00000584887 RGS8P57771 180 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-219ENST00000584887 VLDLRP98155 873 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 NAAAQ02083 359 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 GGTLC2Q14390 218 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 MST1LQ2TV78 715 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 AGKQ53H12 422 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 PAGE3Q5JUK9 113 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 LRIF1Q5T3J3 769 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 FAM69AQ5T7M9 428 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 AGBL2Q5U5Z8 902 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 CARD17Q5XLA6 110 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 PODNL1Q6PEZ8 512 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 DHRS4L2Q6PKH6 230 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 C10orf111Q8N326 155 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 ANKS4BQ8N8V4 417 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 DNAJA4Q8WW22 397 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-219ENST00000584887 BOD1Q96IK1 185 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 NELFAQ9H3P2 528 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 VAPAQ9P0L0 249 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 B3GAT1Q9P2W7 334 aa17.78■□□□□ 0.44
TOP3A-219ENST00000584887 IGKV1D-42A0A075B6H8 117 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 TRAV36DV7A0A075B6V5 113 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 AKAP8O43823 692 aaKnown RBP17.77■□□□□ 0.44
TOP3A-219ENST00000584887 OR2T1O43869 369 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 TPST1O60507 370 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 SEC14L2O76054 403 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 F12P00748 615 aaPredicted RBP17.77■□□□□ 0.44
TOP3A-219ENST00000584887 NQO1P15559 274 aaKnown RBP17.77■□□□□ 0.44
TOP3A-219ENST00000584887 MRPL19P49406 292 aaKnown RBP17.77■□□□□ 0.44
TOP3A-219ENST00000584887 AQP5P55064 265 aa17.77■□□□□ 0.44
TOP3A-219ENST00000584887 NPRL3Q12980 569 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms