RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	ZNF613	Q6PF04	617 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	SSX8	Q7RTT4	187 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	AAED1	Q7RTV5	226 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	EPHX4	Q8IUS5	362 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	LRRC75A-AS1	Q8N1F1	130 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	POU5F2	Q8N7G0	328 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	OR6S1	Q8NH40	331 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF417	Q8TAU3	575 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	PIGT	Q969N2	578 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	SLC25A36	Q96CQ1	311 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	RCN3	Q96D15	328 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF583	Q96ND8	569 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	MCHR1	Q99705	422 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	CCL19	Q99731	98 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	ECSIT	Q9BQ95	431 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	PCDHAC1	Q9H158	963 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	SLCO5A1	Q9H2Y9	848 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	ESRP2	Q9H6T0	727 aa	Known RBP	11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	USP22	Q9UPT9	525 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	RNF115	Q9Y4L5	304 aa		11.7	□□□□□ -0.54
SREBF1-223	ENST00000584760	CIB4	A0PJX0	185 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	DPRX	A6NFQ7	191 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	FAM220BP	B1ANY3	271 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	HS3ST1	O14792	307 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	AIM2	O14862	343 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	CHP2	O43745	196 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	LYPD3	O95274	346 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	THY1	P04216	161 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	CD3E	P07766	207 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	PTN	P21246	168 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	GRPR	P30550	384 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	SELENOP	P49908	381 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	VEZF1	Q14119	521 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	ADAM5	Q6NVV9	412 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	ERICH5	Q6P6B1	374 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	LINC00114	Q6XXX2	140 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	WDR88	Q6ZMY6	472 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	RBM45	Q8IUH3	476 aa	Known RBP	11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	KDM8	Q8N371	416 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	POMGNT2	Q8NAT1	580 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	ADPRHL1	Q8NDY3	354 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	RP9	Q8TA86	221 aa	Known RBP	11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	VANGL1	Q8TAA9	524 aa	Predicted RBP	11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	RASSF5	Q8WWW0	418 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	MUCL1	Q96DR8	90 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	PERP	Q96FX8	193 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	MUS81	Q96NY9	551 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	TMEM43	Q9BTV4	400 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	GID8	Q9NWU2	228 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	SELENON	Q9NZV5	590 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	UPB1	Q9UBR1	384 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	B3GALT5	Q9Y2C3	310 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	SLC25A15	Q9Y619	301 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	HEATR1	Q9H583	2144 aa	Known RBP	11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	CSPG4	Q6UVK1	2322 aa		11.69	□□□□□ -0.54
SREBF1-223	ENST00000584760	CCT8L1P	A6NM43	557 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	CPSF4L	A6NMK7	179 aa	Known RBP	11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF432	O94892	652 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	BGLAP	P02818	100 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	MPG	P29372	298 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	LGALS3BP	Q08380	585 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	ENTPD8	Q5MY95	495 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	C9orf135	Q5VTT2	229 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	OR7E24	Q6IFN5	339 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	PRSS57	Q6UWY2	283 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	LINGO2	Q7L985	606 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	SPATA21	Q7Z572	469 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	TREML1	Q86YW5	311 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	C17orf78	Q8N4C9	275 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF611	Q8N823	705 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	SCAI	Q8N9R8	606 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	KBTBD8	Q8NFY9	601 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	OR52N5	Q8NH56	324 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	RNF217	Q8TC41	542 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	ADAMTS16	Q8TE57	1224 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	SLC41A3	Q96GZ6	507 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	OXGR1	Q96P68	337 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	MOGAT1	Q96PD6	335 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	EPYC	Q99645	322 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	ZNF426	Q9BUY5	554 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	RCE1	Q9Y256	329 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	CORIN	Q9Y5Q5	1042 aa		11.68	□□□□□ -0.54
SREBF1-223	ENST00000584760	ALPK2	Q86TB3	2170 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	LOC102725191	A0A1B0GVB3	256 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	TRAPPC13	A5PLN9	417 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	CLOCK	O15516	846 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	TRAF3IP2	O43734	574 aa	Predicted RBP	11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	CCDC22	O60826	627 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	COX4I1	P13073	169 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	CBL	P22681	906 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	SEC24C	P53992	1094 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	SLC25A3	Q00325	362 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	TGFBR3	Q03167	851 aa		11.67	□□□□□ -0.54
SREBF1-223	ENST00000584760	MFSD13A	Q14CX5	517 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms