RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 WFDC6Q9BQY6 131 aa11.55□□□□□ -0.56
ERBB2-220ENST00000584684 LINC00470Q9BZP3 86 aa11.55□□□□□ -0.56
ERBB2-220ENST00000584684 PCDHAC1Q9H158 963 aa11.55□□□□□ -0.56
ERBB2-220ENST00000584684 NANOGQ9H9S0 305 aa11.55□□□□□ -0.56
ERBB2-220ENST00000584684 TMEM27Q9HBJ8 222 aa11.55□□□□□ -0.56
ERBB2-220ENST00000584684 OBP2BQ9NPH6 170 aa11.55□□□□□ -0.56
ERBB2-220ENST00000584684 SLC17A5Q9NRA2 495 aa11.55□□□□□ -0.56
ERBB2-220ENST00000584684 SELENONQ9NZV5 590 aa11.55□□□□□ -0.56
ERBB2-220ENST00000584684 CORINQ9Y5Q5 1042 aa11.55□□□□□ -0.56
ERBB2-220ENST00000584684 ZNF587BE7ETH6 402 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 M0R082 166 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 ABCD4O14678 606 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 ZNF432O94892 652 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 VIMP08670 466 aaKnown RBP11.54□□□□□ -0.56
ERBB2-220ENST00000584684 CD247P20963 164 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 PAX7P23759 505 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 SELENOPP49908 381 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 CRYBA2P53672 197 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 SH3BGRP55822 239 aaPredicted RBP11.54□□□□□ -0.56
ERBB2-220ENST00000584684 GUCY1A3Q02108 690 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 DUSP7Q16829 419 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 REP15Q6BDI9 236 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 H1FNTQ75WM6 255 aaPredicted RBP11.54□□□□□ -0.56
ERBB2-220ENST00000584684 YTHDF3Q7Z739 585 aaKnown RBP11.54□□□□□ -0.56
ERBB2-220ENST00000584684 BIVMQ86UB2 503 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 DTX2Q86UW9 622 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 WDR31Q8NA23 367 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 SMYD1Q8NB12 490 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 OR52N5Q8NH56 324 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 OR10A6Q8NH74 314 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 ZNF417Q8TAU3 575 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 SMAP2Q8WU79 429 aaPredicted RBP11.54□□□□□ -0.56
ERBB2-220ENST00000584684 TAMM41Q96BW9 452 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 SLC25A36Q96CQ1 311 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 LRRC58Q96CX6 371 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 COX4I2Q96KJ9 171 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 OXGR1Q96P68 337 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 ZNF587Q96SQ5 575 aaPredicted RBP11.54□□□□□ -0.56
ERBB2-220ENST00000584684 FAIMQ9NVQ4 179 aa11.54□□□□□ -0.56
ERBB2-220ENST00000584684 RPL36A-HNRNPH2H7BZ11 118 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 M0QX08 132 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 M0R3H8 397 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 MRASO14807 208 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 TRAF3IP2O43734 574 aaPredicted RBP11.53□□□□□ -0.56
ERBB2-220ENST00000584684 CHP2O43745 196 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 AKAP8O43823 692 aaKnown RBP11.53□□□□□ -0.56
ERBB2-220ENST00000584684 BGLAPP02818 100 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 OPN1SWP03999 348 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 SOD3P08294 240 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 ZNF43P17038 809 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 CD40P25942 277 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 GRPRP30550 384 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 CDH11P55287 796 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 CDH12P55289 794 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 SLC25A3Q00325 362 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 VEZF1Q14119 521 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 NPTX1Q15818 432 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 ETFDHQ16134 617 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 PGGHGQ32M88 737 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 RABL3Q5HYI8 236 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 ERICH5Q6P6B1 374 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 LINC00114Q6XXX2 140 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 SNX32Q86XE0 403 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 OR6T1Q8NGN1 323 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 MAGEE2Q8TD90 523 aaPredicted RBP11.53□□□□□ -0.56
ERBB2-220ENST00000584684 NEUROG1Q92886 237 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 ALKBH3Q96Q83 286 aaPredicted RBP11.53□□□□□ -0.56
ERBB2-220ENST00000584684 ZNF426Q9BUY5 554 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 PRR14Q9BWN1 585 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 MOV10Q9HCE1 1003 aaKnown RBP11.53□□□□□ -0.56
ERBB2-220ENST00000584684 MRPL39Q9NYK5 338 aaKnown RBP11.53□□□□□ -0.56
ERBB2-220ENST00000584684 SEC14L4Q9UDX3 406 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 LAMP3Q9UQV4 416 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 CAPN7Q9Y6W3 813 aa11.53□□□□□ -0.56
ERBB2-220ENST00000584684 ARPC4-TTLL3A0A0A6YYG9 625 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 ATP8B1O43520 1251 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 KRT33AO76009 404 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 LYPD3O95274 346 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 WNT11O96014 354 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 MT-ATP6P00846 226 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 INHBBP09529 407 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 MDH1P40925 334 aaKnown RBP11.52□□□□□ -0.57
ERBB2-220ENST00000584684 ZNF83P51522 516 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 PRPS1P60891 318 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 C3orf36Q3SXR2 165 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 MMEL1Q495T6 779 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 C9orf135Q5VTT2 229 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 NIPAL3Q6P499 406 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 KLHL24Q6TFL4 600 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 TMEM123Q8N131 208 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 PCYOX1LQ8NBM8 494 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 OR1K1Q8NGR3 316 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 C10orf82Q8WW14 230 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 MPP4Q96JB8 637 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 Q96MF0 132 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 MCHR1Q99705 422 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 TRAF4Q9BUZ4 470 aaPredicted RBP11.52□□□□□ -0.57
ERBB2-220ENST00000584684 SLC19A3Q9BZV2 496 aa11.52□□□□□ -0.57
ERBB2-220ENST00000584684 CISD1Q9NZ45 108 aaKnown RBP11.52□□□□□ -0.57
ERBB2-220ENST00000584684 TRAPPC13A5PLN9 417 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms