RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 NR5A2O00482 541 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 FRS3O43559 492 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 AHSA1O95433 338 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 WNT11O96014 354 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 PRG2P13727 222 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 HOXB9P17482 250 aaPredicted RBP9.74□□□□□ -0.85
CCDC47-206ENST00000584112 CD40P25942 277 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 GTF2E2P29084 291 aaKnown RBP9.74□□□□□ -0.85
CCDC47-206ENST00000584112 MPGP29372 298 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 PRKAR1BP31321 381 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 IDH3AP50213 366 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 ATP4BP51164 291 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 AQP5P55064 265 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 BNIP2Q12982 314 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 SQLEQ14534 574 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 NRF1Q16656 503 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 GCNT6Q5T4J0 391 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 TSPO2Q5TGU0 170 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 KLHL24Q6TFL4 600 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 C5orf46Q6UWT4 87 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 AAED1Q7RTV5 226 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 KRT73Q86Y46 540 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 MAL2Q969L2 176 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 HS6ST2Q96MM7 605 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 SPATA5L1Q9BVQ7 753 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 FKRPQ9H9S5 495 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 C12orf10Q9HB07 376 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 SLCO1B3Q9NPD5 702 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 SLC17A5Q9NRA2 495 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 CCDC167Q9P0B6 97 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 RASD1Q9Y272 281 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 CHST2Q9Y4C5 530 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 PCDHGB1Q9Y5G3 927 aa9.74□□□□□ -0.85
CCDC47-206ENST00000584112 A0A1W2PR80 420 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 ELOA3DA6NLF2 546 aaPredicted RBP9.73□□□□□ -0.85
CCDC47-206ENST00000584112 EVPLLA8MZ36 301 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 NPIPB7O75200 414 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 KRT33AO76009 404 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 CD8AP01732 235 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 NUDT7P0C024 238 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 ARAFP10398 606 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 PAX7P23759 505 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 FOXG1P55316 489 aaPredicted RBP9.73□□□□□ -0.85
CCDC47-206ENST00000584112 PRPS1P60891 318 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 ELOA3BQ3SY89 546 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 C9orf135Q5VTT2 229 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 REEP3Q6NUK4 255 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 FUNDC1Q8IVP5 155 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 FBXL14Q8N1E6 418 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 ZIC4Q8N9L1 334 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 BHLHE22Q8NFJ8 381 aaPredicted RBP9.73□□□□□ -0.85
CCDC47-206ENST00000584112 ELOA3Q8NG57 546 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 MFSD8Q8NHS3 518 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 NFKBIDQ8NI38 313 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 ADAD1Q96M93 576 aaKnown RBP9.73□□□□□ -0.85
CCDC47-206ENST00000584112 ZNF385AQ96PM9 386 aaKnown RBP9.73□□□□□ -0.85
CCDC47-206ENST00000584112 DHRS9Q9BPW9 319 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 EBF4Q9BQW3 602 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 RABEP2Q9H5N1 569 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 OBP2BQ9NPH6 170 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 CBLN4Q9NTU7 201 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 SLC25A37Q9NYZ2 338 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 GMEB1Q9Y692 573 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 PCLOQ9Y6V0 5065 aa9.73□□□□□ -0.85
CCDC47-206ENST00000584112 IGHV4-30-2A0A087WSY4 118 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 PRORSD1PA6NEY8 169 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 HMGB1P1B2RPK0 211 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-206ENST00000584112 E7EQL1 145 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 ZNF587BE7ETH6 402 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 OR2T1O43869 369 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 IGHV4-39P01824 125 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 TTKP33981 857 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 FABP6P51161 128 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 P2RY4P51582 365 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 NCALDP61601 193 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 VLDLRP98155 873 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 CDK6Q00534 326 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 AGKQ53H12 422 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 TTMPQ5BVD1 217 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 ZNF544Q6NX49 715 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 DHRS4L2Q6PKH6 230 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 C6orf89Q6UWU4 347 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 DNM1P46Q6ZS02 220 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 CREB3L2Q70SY1 520 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 MUC15Q8N387 334 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 LSMEM1Q8N8F7 131 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 WDR31Q8NA23 367 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 DNAJA4Q8WW22 397 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-206ENST00000584112 STON2Q8WXE9 905 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 SLC38A4Q969I6 547 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 SLC25A36Q96CQ1 311 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 BOD1Q96IK1 185 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 ZNF317Q96PQ6 595 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-206ENST00000584112 TNFRSF13CQ96RJ3 184 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 ZNF607Q96SK3 696 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 EVA1AQ9H8M9 152 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 INTS9Q9NV88 658 aaKnown RBP9.72□□□□□ -0.85
CCDC47-206ENST00000584112 SELENONQ9NZV5 590 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 VAPAQ9P0L0 249 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms