RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 DENND6BQ8NEG7 585 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OR4F6Q8NGB9 312 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OR52B6Q8NGF0 335 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OR13C4Q8NGS5 318 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OR2T29Q8NH02 315 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OR10A6Q8NH74 314 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 MCFD2Q8NI22 146 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 FBXO30Q8TB52 745 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 NDNFQ8TB73 568 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CD200R1Q8TD46 325 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 UBTD2Q8WUN7 234 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC13A3Q8WWT9 602 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 RASSF5Q8WWW0 418 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PIK3R3Q92569 461 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 MYDGFQ969H8 173 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 TESCQ96BS2 214 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 DCPSQ96C86 337 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ERLEC1Q96DZ1 483 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OMA1Q96E52 524 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ZHX1-C8orf76Q96EF9 292 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 BSCL2Q96G97 398 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ITCHQ96J02 903 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CAPNS2Q96L46 248 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 FCRL1Q96LA6 429 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 KLHL5Q96PQ7 755 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PSKH2Q96QS6 385 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OR52E6Q96RD3 313 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PIGQQ9BRB3 760 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 DGCR6LQ9BY27 220 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 DPY30Q9C005 99 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OR2B2Q9GZK3 357 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 TPK1Q9H3S4 243 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 EQTNQ9NQ60 294 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 DCAF16Q9NXF7 216 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 QPCTLQ9NXS2 382 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 TAS2R3Q9NYW6 316 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CD274Q9NZQ7 290 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CCDC59Q9P031 241 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PSORS1C1Q9UIG5 152 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 TRMT6Q9UJA5 497 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SAMD4AQ9UPU9 718 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 RPH3AQ9Y2J0 694 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OARD1Q9Y530 152 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PEX16Q9Y5Y5 336 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ARL5AQ9Y689 179 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 BPTFQ12830 3046 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SHROOM3Q8TF72 1996 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 EFCAB9A8MZ26 197 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 EVPLLA8MZ36 301 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 MANBAO00462 879 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 CCL22O00626 93 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 ST8SIA3O43173 380 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 ZW10O43264 779 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 AIREO43918 545 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 SMPD2O60906 423 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 SCN2BO60939 215 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 CLDN1O95832 211 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 SERPINA1P01009 418 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 MT-ND2P03891 347 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 RPLP0P05388 317 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 CDK1P06493 297 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 ZDHHC11BP0C7U3 371 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 BCKDHAP12694 445 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 ANXA8P13928 327 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 IGFBP5P24593 272 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 AZGP1P25311 298 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 S100A3P33764 101 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 KDELR2P33947 212 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 GGT2P36268 569 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 DDOSTP39656 456 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 MAP2K4P45985 399 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 RPS5P46782 204 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 RABIFP47224 123 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 CAMLGP49069 296 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC26A5P58743 744 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 COPZ1P61923 177 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 RPS14P62263 151 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 RPS18P62269 152 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 RPP38P78345 283 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 RIPPLY1Q0D2K3 151 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 HKDC1Q2TB90 917 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 GGTA1PQ4G0N0 100 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 IFI44LQ53G44 452 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 CTSL3PQ5NE16 218 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 AGAP6Q5VW22 663 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 LYPLAL1Q5VWZ2 237 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 RNLSQ5VYX0 342 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 FAM219BQ5XKK7 198 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 TWF2Q6IBS0 349 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF544Q6NX49 715 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 CORO6Q6QEF8 472 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 PAQR6Q6TCH4 344 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 SBSNQ6UWP8 590 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 CCBE1Q6UXH8 406 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 GDPGP1Q6ZNW5 385 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 ADAMTSL2Q86TH1 951 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 TLK2Q86UE8 772 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 AKAP14Q86UN6 197 aa3.42□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF595Q8IYB9 648 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms