RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 PLEKP08567 350 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 RBMY1DP0C7P1 496 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 RBMY1A1P0DJD3 496 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 MAGP20916 626 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 PTMSP20962 102 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 CMA1P23946 247 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 GNA11P29992 359 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 OTX2P32243 289 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 LONP1P36776 959 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 GSSP48637 474 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 NMUP48645 174 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 CRISP3P54108 245 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 DMRTC1Q5HYR2 192 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 C1orf220Q5T0J3 134 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 CAMK2N1Q7Z7J9 78 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 CCDC54Q8NEL0 328 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 OR52H1Q8NGJ2 320 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 RLN3Q8WXF3 142 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 UBE2E3Q969T4 207 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 CLMPQ9H6B4 373 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 RMND5AQ9H871 391 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 NHEJ1Q9H9Q4 299 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 IL26Q9NPH9 171 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 CLCF1Q9UBD9 225 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 GNPTGQ9UJJ9 305 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 TMCC3Q9ULS5 477 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 TMCO1Q9UM00 188 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 PNPLA6Q8IY17 1366 aa2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 RPAP1Q9BWH6 1393 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-204ENST00000581226 SPAG6O75602 509 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 SCGNO76038 276 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 HPGDP15428 266 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 IL12AP29459 219 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 QARSP47897 775 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 CASP4P49662 377 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 EFNB2P52799 333 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 ACTA1P68133 377 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 KIAA0087Q14695 138 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 C16orf72Q14CZ0 275 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 DUSP7Q16829 419 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 OR52W1Q6IF63 320 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 SAXO1Q8IYX7 474 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 ACOT4Q8N9L9 421 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 OR10G9Q8NGN4 311 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 DTX3LQ8TDB6 740 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 MCOLN3Q8TDD5 553 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 GIMAP1Q8WWP7 306 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 UFD1Q92890 307 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 TRIM44Q96DX7 344 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 CEP170P1Q96L14 293 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 OXGR1Q96P68 337 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 CLCC1Q96S66 551 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 DEFB127Q9H1M4 99 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 ZFP14Q9HCL3 533 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 DMAP1Q9NPF5 467 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 TBX21Q9UL17 535 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 HEBP2Q9Y5Z4 205 aa2.73□□□□□ -1.97
SMCHD1-204ENST00000581226 ARHGAP21Q5T5U3 1957 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 C12orf77C9JDV5 145 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 DLGAP1O14490 977 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 MED7O43513 233 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 MED6O75586 246 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 PTMAP06454 111 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 UBE2HP62256 183 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 KLRB1Q12918 225 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 CYTH1Q15438 398 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 RFX4Q33E94 735 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 NLRP9Q7RTR0 991 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 ZNF546Q86UE3 836 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 VSTM4Q8IW00 320 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 H1FOOQ8IZA3 346 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 ARL6IP6Q8N6S5 226 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 OR4F15Q8NGB8 312 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 ZNF596Q8TC21 504 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 ACOT11Q8WXI4 607 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 EMG1Q92979 244 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 CXorf40BQ96DE9 158 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 FOPNLQ96NB1 174 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 RBM14Q96PK6 669 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 CRACR2AQ9BSW2 395 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 RIOK2Q9BVS4 552 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 GPR61Q9BZJ8 451 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 CDC42EP4Q9H3Q1 356 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 TPK1Q9H3S4 243 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 SRMSQ9H3Y6 488 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 GLRX2Q9NS18 164 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 ZNF226Q9NYT6 803 aa2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 MRPS7Q9Y2R9 242 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 MTCL1Q9Y4B5 1905 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-204ENST00000581226 KIR2DL5BA0A0G2JN68 375 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 KIR2DL5BA0A0G2JPC4 375 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 C12orf71A8MTZ7 269 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 SS18L1O75177 396 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 WISP3O95389 354 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 ZNF44P15621 663 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 TBPP20226 339 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 RPS9P46781 194 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 PDIA2Q13087 525 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 PLD1Q13393 1074 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms