RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 TRAV26-1A0A087WT03 109 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 A0A1B0GVL5 298 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 FAM240BA0A1B0GVZ2 78 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 NPIPA2E9PIF3 369 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 BCKDKO14874 412 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 OR1F1O43749 312 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 DUX1O43812 170 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 ZNF354AO60765 605 aaPredicted RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 AXLP30530 894 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 CD80P33681 288 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 DAOAP59103 153 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 DSTNP60981 165 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 TNNC1P63316 161 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 MYBPC1Q00872 1141 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 MSLNQ13421 630 aaPredicted RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 STX1AQ16623 288 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 EXOC3L2Q2M3D2 409 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 VWA2Q5GFL6 755 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 LIPJQ5W064 366 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 SLC22A10Q63ZE4 541 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 REP15Q6BDI9 236 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 RNASEKQ6P5S7 137 aaKnown RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 SLC39A4Q6P5W5 647 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 CD164L2Q6UWJ8 174 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 Q6ZR54 194 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 TRPM8Q7Z2W7 1104 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 LINC00523Q86TU6 105 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 MARCH9Q86YJ5 346 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 HIPK1Q86Z02 1210 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 LRRC8AQ8IWT6 810 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 GVQW1Q8N7I0 195 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 ZNF397Q8NF99 534 aaPredicted RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 OR1K1Q8NGR3 316 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 TRMT10AQ8TBZ6 339 aaKnown RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 GPX8Q8TED1 209 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 AGAP11Q8TF27 550 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 PHYHIPQ92561 330 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 RAB1CQ92928 201 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 MRPL53Q96EL3 112 aaKnown RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 ELMO2Q96JJ3 720 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 HINT2Q9BX68 163 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 NDEL1Q9GZM8 345 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 SLC38A10Q9HBR0 1119 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 SGK2Q9HBY8 427 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 TECRQ9NZ01 308 aaKnown RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 EIF3KQ9UBQ5 218 aaKnown RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 DCDC2Q9UHG0 476 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 MRTO4Q9UKD2 239 aaKnown RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 CDH9Q9ULB4 789 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 B9D1Q9UPM9 204 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 RBMX2Q9Y388 322 aaKnown RBP3.41□□□□□ -1.86
NF1-220ENST00000581113 OR10H1Q9Y4A9 318 aa3.41□□□□□ -1.86
NF1-220ENST00000581113 ZNF236Q9UL36 1845 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 A0A0G2JMZ2 1700 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 GOLGA8QA0A0J9YX86 632 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 SH3PXD2BA1X283 911 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 POLR1CO15160 346 aaPredicted RBP3.4□□□□□ -1.87
NF1-220ENST00000581113 VENTXO95231 258 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 SYNGR4O95473 234 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 PGK1P00558 417 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 CT45A8P0DMV1 189 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 CT45A9P0DMV2 189 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 CPN1P15169 458 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 MSR1P21757 451 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 HTR2AP28223 471 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 HOXA6P31267 233 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 ELK3P41970 407 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 TNFRSF4P43489 277 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 C21orf59P57076 290 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 RAB11AP62491 216 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 PPIAP62937 165 aaKnown RBP3.4□□□□□ -1.87
NF1-220ENST00000581113 CCZ1BP86790 482 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 CCZ1P86791 482 aaPredicted RBP3.4□□□□□ -1.87
NF1-220ENST00000581113 DR1Q01658 176 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 RCAN2Q14206 197 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 EMC2Q15006 297 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 ALX1Q15699 326 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 RAB11BQ15907 218 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 BCL2A1Q16548 175 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 CT45A2Q5DJT8 189 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 XKR7Q5GH72 579 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 C1orf189Q5VU69 101 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 PTRHD1Q6GMV3 140 aaKnown RBP3.4□□□□□ -1.87
NF1-220ENST00000581113 C8orf74Q6P047 294 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 NIPAL3Q6P499 406 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 LRRC6Q86X45 466 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 SLC38A6Q8IZM9 456 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 PYROXD2Q8N2H3 581 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 CHDHQ8NE62 594 aaPredicted RBP3.4□□□□□ -1.87
NF1-220ENST00000581113 OR4L1Q8NH43 312 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 ZPLD1Q8TCW7 415 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 PAQR8Q8TEZ7 354 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 GLYATL2Q8WU03 294 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 ST8SIA1Q92185 356 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 PIGCQ92535 297 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 KIFAP3Q92845 792 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 CASD1Q96PB1 797 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 ZNF317Q96PQ6 595 aaPredicted RBP3.4□□□□□ -1.87
NF1-220ENST00000581113 CNPY3Q9BT09 278 aa3.4□□□□□ -1.87
NF1-220ENST00000581113 WRAP53Q9BUR4 548 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms