RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 SMCPP49901 116 aaPredicted RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 CASP9P55211 416 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 WNT3P56703 355 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 SLC37A1P57057 533 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 MLF1P58340 268 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 MTPNP58546 118 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 DSCR9P59020 149 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 RNF4P78317 190 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 IFITM3Q01628 133 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 HSPB3Q12988 150 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 MAD2L1Q13257 205 aaPredicted RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 ELAVL1Q15717 326 aaKnown RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 TRIM16LQ309B1 348 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PRR31Q5SQ13 230 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 LRIF1Q5T3J3 769 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 SPINK14Q6IE38 97 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 OR4F3Q6IEY1 312 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ENPP6Q6UWR7 440 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 TMEM107Q6UX40 140 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PLEKHM3Q6ZWE6 761 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 CCDC80Q76M96 950 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 TRILQ7L0X0 811 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 OLIG3Q7RTU3 272 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PRSS48Q7RTY5 328 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 TMEM179BQ7Z7N9 219 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 GALNT10Q86SR1 603 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 MSRB3Q8IXL7 192 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PEX5LQ8IYB4 626 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PM20D2Q8IYS1 436 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PRR22Q8IZ63 422 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 CLECL1Q8IZS7 167 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 CADM3Q8N126 398 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 OR8H3Q8N146 312 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 RFLNBQ8N5W9 214 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 LRRC17Q8N6Y2 441 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 FAM86B1Q8N7N1 296 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ZNF615Q8N8J6 731 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 B3GNT7Q8NFL0 401 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 OR4N2Q8NGD1 307 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 OR10A6Q8NH74 314 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 RHOXF1Q8NHV9 184 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 DYNC2LI1Q8TCX1 351 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 RIT1Q92963 219 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 CTHRC1Q96CG8 243 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 YIPF6Q96EC8 236 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ZBED6CLQ96FA7 236 aaPredicted RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 TRMT61AQ96FX7 289 aaKnown RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 REXO5Q96IC2 774 aaKnown RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 C16orf92Q96LL3 132 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ZNF300Q96RE9 604 aaPredicted RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 SIGLEC11Q96RL6 698 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ABHD1Q96SE0 405 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 SHARPINQ9H0F6 387 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 GABARAPL1Q9H0R8 117 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 REEP4Q9H6H4 257 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 SLC35C2Q9NQQ7 365 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PAK1IP1Q9NWT1 392 aaPredicted RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 SLC25A37Q9NYZ2 338 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 C19orf53Q9UNZ5 99 aaPredicted RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 FAM32AQ9Y421 112 aaKnown RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 TESMINQ9Y4I5 508 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 UGT2A1Q9Y4X1 527 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 CLCA3PQ9Y6N3 262 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 SPACA6W5XKT8 324 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 MED12Q93074 2177 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 CLDN24A6NM45 220 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 G3V3Y1 287 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 CXCR6O00574 342 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 SCAMP2O15127 329 aaKnown RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 SCN2BO60939 215 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ERN1O75460 977 aaKnown RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 OR2J2O76002 312 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 C6orf47O95873 294 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 EPPINO95925 133 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ABCB1P08183 1280 aaPredicted RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 SNRNP70P08621 437 aaKnown RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 POU2F1P14859 743 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 IL7RP16871 459 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 CSNK2A2P19784 350 aaPredicted RBP3.06□□□□□ -1.92
CDH19-204ENST00000579658 CFPP27918 469 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PTPN6P29350 595 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ADH7P40394 386 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 MC3RP41968 323 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 EMDP50402 254 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 NCBP2P52298 156 aaKnown RBP eCLIP3.06□□□□□ -1.92
CDH19-204ENST00000579658 RAD23AP54725 363 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 CSNK2BP67870 215 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PLGLB1Q02325 96 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 MVKQ03426 396 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 FUT7Q11130 342 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 FADDQ13158 208 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 SCGB2A2Q13296 93 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 PDE7AQ13946 482 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 SERTAD2Q14140 314 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 DGUOKQ16854 277 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 ZNF628Q5EBL2 1059 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 RNFT1Q5M7Z0 435 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 SPANXN4Q5MJ08 99 aa3.06□□□□□ -1.92
CDH19-204ENST00000579658 KDM4DQ6B0I6 523 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms