RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 IKZF2Q9UKS7 526 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 PSME2Q9UL46 239 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 USP16Q9Y5T5 823 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 SYNRGQ9UMZ2 1314 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 PLEKHG2Q9H7P9 1386 aa1.81□□□□□ -2.12
COPS3-213ENST00000577210 TDRD15B5MCY1 1934 aaKnown RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 PPIAL4EA0A075B759 164 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 A0A1B0GWB2 263 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 CCDC182A6NF36 153 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 ERICH4A6NGS2 130 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 IDSB3KWA1 339 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 TCP11X1B4DZS4 312 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 SUPT3HB4E1H0 165 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 TRDCB7Z8K6 153 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 F5H6K3 240 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 CDX4O14627 284 aaPredicted RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 HSD17B6O14756 317 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 EIF3HO15372 352 aaKnown RBP eCLIP1.8□□□□□ -2.12
COPS3-213ENST00000577210 AKR7A2O43488 359 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 LATO43561 262 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 PSTPIP1O43586 416 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 LGI1O95970 557 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 FTH1P02794 183 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 STAG3L3P0CL85 134 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 RBMY1CP0DJD4 496 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 PPIAL4FP0DN26 164 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 ATP6V1B2P21281 511 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 KITLGP21583 273 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 SLC2A5P22732 501 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 PRDX3P30048 256 aaKnown RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 STARP49675 285 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 PLP1P60201 277 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 KLRC3Q07444 240 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 MERTKQ12866 999 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 PPIL2Q13356 520 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 IL18Q14116 193 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 ARHGAP19Q14CB8 494 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 TGFBIQ15582 683 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 HADHQ16836 314 aaKnown RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 SPANXN2Q5MJ10 180 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 C1orf220Q5T0J3 134 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 C11orf71Q6IPW1 123 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 SLC8B1Q6J4K2 584 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 CXCL17Q6UXB2 119 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 ANGPTL8Q6UXH0 198 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 HSDL2Q6YN16 418 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 ACOT7LQ6ZUV0 252 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 BZW1Q7L1Q6 419 aaKnown RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 CENPQQ7L2Z9 268 aaPredicted RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 NIPA1Q7RTP0 329 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 TMCO2Q7Z6W1 182 aaPredicted RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 ERI1Q8IV48 349 aaKnown RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 CEP112Q8N8E3 955 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 FAM184AQ8NB25 1140 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 TRPV1Q8NER1 839 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 OR10H4Q8NGA5 316 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 OR4K14Q8NGD5 310 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 OR56B4Q8NH76 319 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 UCN3Q969E3 161 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 ELSPBP1Q96BH3 223 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 HAVCR1Q96D42 359 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 TM4SF19Q96DZ7 209 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 NUS1Q96E22 293 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 CMTM7Q96FZ5 175 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 PLEKHA8Q96JA3 519 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 SLC35E1Q96K37 410 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 PGLYRP4Q96LB8 373 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 OXGR1Q96P68 337 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 MBOAT4Q96T53 435 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 HIST1H4GQ99525 98 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 GAL3ST1Q99999 423 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 ZNF670Q9BS34 389 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 MTG1Q9BT17 334 aaPredicted RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 C20orf24Q9BUV8 137 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 ACTR6Q9GZN1 396 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 IQCGQ9H095 443 aaKnown RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 ANKRD19PQ9H560 264 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 NARFLQ9H6Q4 476 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 NHEJ1Q9H9Q4 299 aaPredicted RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 NANOGQ9H9S0 305 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 ZNF160Q9HCG1 818 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 PDP1Q9P0J1 537 aaPredicted RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 NYAP2Q9P242 653 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 PSMC3IPQ9P2W1 217 aaPredicted RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 VANGL2Q9ULK5 521 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 NAP1L2Q9ULW6 460 aaPredicted RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 STAP1Q9ULZ2 295 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 UBQLN1Q9UMX0 589 aaKnown RBP1.8□□□□□ -2.12
COPS3-213ENST00000577210 TRAF3IP3Q9Y228 551 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 RASD1Q9Y272 281 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 KCNIP3Q9Y2W7 256 aa1.8□□□□□ -2.12
COPS3-213ENST00000577210 NSG1A0A0A6YYJ2 146 aa1.79□□□□□ -2.12
COPS3-213ENST00000577210 ZNF705EA8MWA4 302 aaPredicted RBP1.79□□□□□ -2.12
COPS3-213ENST00000577210 H0YIV9 168 aa1.79□□□□□ -2.12
COPS3-213ENST00000577210 GFYI3L273 518 aa1.79□□□□□ -2.12
COPS3-213ENST00000577210 DCTN6O00399 190 aa1.79□□□□□ -2.12
COPS3-213ENST00000577210 CLOCKO15516 846 aa1.79□□□□□ -2.12
COPS3-213ENST00000577210 EMC8O43402 210 aa1.79□□□□□ -2.12
COPS3-213ENST00000577210 UGT1A9O60656 530 aa1.79□□□□□ -2.12
COPS3-213ENST00000577210 SLITRK3O94933 977 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms