RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SYNGR3O43761 229 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 SEC14L2O76054 403 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 AGR2O95994 175 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 BCL10O95999 233 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 TFP02787 698 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 CHRM4P08173 479 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 GKN3PP0CG01 181 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 NAT2P11245 290 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 ACHEP22303 614 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 NR4A1P22736 598 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 ARR3P36575 388 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 CAPZA2P47755 286 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 MAP2K6P52564 334 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 CLDN8P56748 225 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 CLDN17P56750 224 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 EPS8Q12929 822 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 SYPL1Q16563 259 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 ZNF311Q5JNZ3 666 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 TREML4Q6UXN2 200 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 TRMT10CQ7L0Y3 403 aaKnown RBP8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 RIBC1Q8N443 379 aaPredicted RBP8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 ANKFN1Q8N957 763 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 OIT3Q8WWZ8 545 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 MS4A3Q96HJ5 214 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 ZNF317Q96PQ6 595 aaPredicted RBP8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 TAPBPLQ9BX59 468 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 SUCNR1Q9BXA5 334 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 LINC00470Q9BZP3 86 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 POLE3Q9NRF9 147 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 RLIMQ9NVW2 624 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 MYEF2Q9P2K5 600 aaKnown RBP8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 AGAP5A6NIR3 686 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 ARHGAP32A7KAX9 2087 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 RPL36A-HNRNPH2H7BZ11 118 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 HMGN4O00479 90 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 COPEO14579 308 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 CDC14BO60729 498 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 NCR1O76036 304 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 ZNF432O94892 652 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 VAMP5O95183 116 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 MPZL1O95297 269 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 FAM153BP0C7A2 387 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 HKR1P10072 659 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 IL7RP16871 459 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 UQCRC2P22695 453 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 ALDH3A1P30838 453 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 ARRB2P32121 409 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 EVX1P49640 407 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 UBA52P62987 128 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 POU3F1Q03052 451 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 MVKQ03426 396 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 PIGFQ07326 219 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 FOXL1Q12952 345 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 GSTA3Q16772 222 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 CEACAM16Q2WEN9 425 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 ALKBH6Q3KRA9 238 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 MIDNQ504T8 468 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 AVPI1Q5T686 147 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 PRAMEF8Q5VWM4 474 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 PRAMEF7Q5VXH5 474 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 SAXO2Q658L1 398 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 C4orf33Q8N1A6 199 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 CADM2Q8N3J6 435 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 BPIFB2Q8N4F0 458 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 IL17RDQ8NFM7 739 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 RNF217Q8TC41 542 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 TAF15Q92804 592 aaKnown RBP eCLIP8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 SLC25A36Q96CQ1 311 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 TUBGCP3Q96CW5 907 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 DUX5Q96PT3 197 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 MECRQ9BV79 373 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 GPR35Q9HC97 309 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 SLC52A3Q9NQ40 469 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 DDX28Q9NUL7 540 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 SEC14L4Q9UDX3 406 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 DUSP13Q9UII6 198 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 ZDHHC2Q9UIJ5 367 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 WNK2Q9Y3S1 2297 aa8.67□□□□□ -1.02
NPLOC4-220ENST00000576940 A0A0G2JK05 382 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 A8MVM7 634 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 FAAHO00519 579 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 RNASET2O00584 256 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 NPHS1O60500 1241 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 ERLIN1O75477 346 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 RP2O75695 350 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 HLA-HP01893 362 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 SHBGP04278 402 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 GSNP06396 782 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 TFPTP0C1Z6 253 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 ZNF35P13682 527 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 ANPEPP15144 967 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 KRT4P19013 534 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 ZFP36P26651 326 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 GLRXP35754 106 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 ACAA2P42765 397 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 MAGEB1P43366 347 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 SH3BGRP55822 239 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 HPCAP84074 193 aa8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 PDCD2Q16342 344 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-220ENST00000576940 PHYHD1Q5SRE7 291 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms