RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 KLHL13Q9P2N7 655 aa8.41□□□□□ -1.06
NPLOC4-219ENST00000576713 ZNF629Q9UEG4 869 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-219ENST00000576713 VPS13CQ709C8 3753 aa8.41□□□□□ -1.06
NPLOC4-219ENST00000576713 EEF1E1-BLOC1S5C9J1V9 151 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 SULT2B1O00204 365 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 DVL2O14641 736 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 EEF1E1O43324 174 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 CYTIPO60759 359 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 ZNF682O95780 498 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 HSD17B1P14061 328 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 PRF1P14222 555 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 ATP6V1B2P21281 511 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 CCKARP32238 428 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 HTR3AP46098 478 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 RPS5P46782 204 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 YAP1P46937 504 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 OR2B6P58173 313 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 COPZ1P61923 177 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 SELENOWP63302 87 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 PIN1Q13526 163 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 OR7A5Q15622 319 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 IQCCQ4KMZ1 466 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 ALG10BQ5I7T1 473 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 C1orf140Q5VVS0 124 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 SP5Q6BEB4 398 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 GLYATQ6IB77 296 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 CYP2R1Q6VVX0 501 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 CBLL1Q75N03 491 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 CHMP1BQ7LBR1 199 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 GDF7Q7Z4P5 450 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 MED12LQ86YW9 2145 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 NKAIN4Q8IVV8 208 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 TUSC5Q8IXB3 177 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 TMEM99Q8N816 258 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 ZNF610Q8N9Z0 462 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 SLC26A7Q8TE54 656 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 ADAMTS16Q8TE57 1224 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 SLC25A43Q8WUT9 341 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 KISS1RQ969F8 398 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 CPNE4Q96A23 557 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 MOGAT1Q96PD6 335 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 SFXN3Q9BWM7 321 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 TRIM2Q9C040 744 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 ENKD1Q9H0I2 346 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 ARMC7Q9H6L4 198 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 CACYBPQ9HB71 228 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 KCNJ16Q9NPI9 418 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 MAN2C1Q9NTJ4 1040 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 MCTS1Q9ULC4 181 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 A4GNTQ9UNA3 340 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 HDGFL3Q9Y3E1 203 aa8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 KLF2Q9Y5W3 355 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-219ENST00000576713 MAST4O15021 2626 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 HCFC1P51610 2035 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 A0A087WUJ7 227 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 TRBV23-1A0A0A0MS06 115 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 GJE1A6NN92 205 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 A8MVM7 634 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 A8MXE2 369 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 ARPC2O15144 300 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 GSTA4O15217 222 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 FMO6PO60774 539 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 FZD7O75084 574 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 PRSS23O95084 383 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 AKR7A3O95154 331 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 SYNGR4O95473 234 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 IL18BPO95998 194 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 BGLAPP02818 100 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 SEMG1P04279 462 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 UQCRBP14927 111 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 CALB2P22676 271 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 CBLP22681 906 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 OPRM1P35372 400 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 IDUAP35475 653 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 CLK1P49759 484 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 MXRA7P84157 204 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 MS4A2Q01362 244 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 FAM27E3Q08E93 113 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 FOXD4Q12950 439 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 SF3B4Q15427 424 aaKnown RBP eCLIP8.39□□□□□ -1.072e-8■■■■■ 76.4
NPLOC4-219ENST00000576713 SLC25A35Q3KQZ1 300 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 FBXL19-AS1Q494R0 122 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 ULK3Q6PHR2 472 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 DEF8Q6ZN54 512 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 RANBP3LQ86VV4 465 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 KDM8Q8N371 416 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 Q8N3U1 123 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 ZIC4Q8N9L1 334 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 BHLHE22Q8NFJ8 381 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 TMEM255BQ8WV15 326 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 DDIT4LQ96D03 193 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 GMPPAQ96IJ6 420 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 C7orf34Q96L11 122 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 ZNF426Q9BUY5 554 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 POTEKPQ9BYX7 375 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 PRRG4Q9BZD6 226 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 BCO1Q9HAY6 547 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 C12orf10Q9HB07 376 aa8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 MEPEQ9NQ76 525 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-219ENST00000576713 DCAF13Q9NV06 445 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms