RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TFP02787 698 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 TFPTP0C1Z6 253 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 LYNX1P0DP58 116 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 SAGP10523 405 aaPredicted RBP10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 ZNF43P17038 809 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 EGR1P18146 543 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 GPR6P46095 362 aaPredicted RBP10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 EVX1P49640 407 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 P2RY4P51582 365 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 CLNS1AP54105 237 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 ARF1P84077 181 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 BNIP2Q12982 314 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 PDCD2Q16342 344 aaPredicted RBP10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 SLC9B1Q4ZJI4 515 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 KRT80Q6KB66 452 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 MYPOPQ86VE0 399 aaPredicted RBP10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 EPHX4Q8IUS5 362 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 GPR137CQ8N3F9 429 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 EIF1ADQ8N9N8 165 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 OR51F2Q8NH61 342 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 FAM216AQ8WUB2 273 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 PPP1R36Q96LQ0 422 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 RBM4Q9BWF3 364 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 AKTIPQ9H8T0 292 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 NOX3Q9HBY0 568 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 RLIMQ9NVW2 624 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 PCDHB10Q9UN67 800 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 USP22Q9UPT9 525 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 SPEF1Q9Y4P9 236 aa10.05□□□□□ -0.8
CTDNEP1-212ENST00000576613 TLDC2A0PJX2 215 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 TMEM89A2RUT3 159 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 CCDC154A6NI56 674 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 E9PBE3 544 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 AHSA1O95433 338 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 GKN3PP0CG01 181 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 NCF2P19878 526 aaPredicted RBP10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 ACHEP22303 614 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 S100A3P33764 101 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 CAPZA2P47755 286 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 LIMS1P48059 325 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 CLDN17P56750 224 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 HILS1P60008 231 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 LIN52Q52LA3 116 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 SPANXN4Q5MJ08 99 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 USP43Q70EL4 1123 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 MDP1Q86V88 176 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 LSRQ86X29 649 aaPredicted RBP10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 RIBC1Q8N443 379 aaPredicted RBP10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 CLDND2Q8NHS1 167 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 MFSD8Q8NHS3 518 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 STK35Q8TDR2 534 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 TCP10LQ8TDR4 215 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 MRPL24Q96A35 216 aaKnown RBP10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 CCDC115Q96NT0 180 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 LRRC37BQ96QE4 947 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 PANX1Q96RD7 426 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 NARFLQ9H6Q4 476 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 CACYBPQ9HB71 228 aaKnown RBP10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 LPAR2Q9HBW0 351 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 REV1Q9UBZ9 1251 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 BTNL2Q9UIR0 455 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 NOX1Q9Y5S8 564 aa10.04□□□□□ -0.8
CTDNEP1-212ENST00000576613 TRAV20A0A0B4J274 112 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 TMEM229AB2RXF0 380 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 AKAP8O43823 692 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 NPIPB7O75200 414 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 SPAG7O75391 227 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 RGS9O75916 674 aaPredicted RBP10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 PNPP00491 289 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 BPGMP07738 259 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 IGFBP1P08833 259 aaPredicted RBP10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 PNMTP11086 282 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 CREB1P16220 341 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 EPHA1P21709 976 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 NR4A1P22736 598 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 ACAA2P42765 397 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 LRRC74AQ0VAA2 488 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 C1DQ13901 141 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 CEACAM16Q2WEN9 425 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 ELFN2Q5R3F8 820 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 RNF220Q5VTB9 566 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 FAHD2BQ6P2I3 314 aaPredicted RBP10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 ZNF836Q6ZNA1 936 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 PEG10Q86TG7 708 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 LRRC34Q8IZ02 419 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 PIK3C3Q8NEB9 887 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 OR52P1PQ8NH57 321 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 RDH5Q92781 318 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 SLC25A36Q96CQ1 311 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 FAHD2AQ96GK7 314 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 MRPL37Q9BZE1 423 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 ARMC7Q9H6L4 198 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 GPR35Q9HC97 309 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 CALML5Q9NZT1 146 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 P2RX2Q9UBL9 471 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 PKD1L1Q8TDX9 2849 aa10.03□□□□□ -0.8
CTDNEP1-212ENST00000576613 ZNF503-AS2A6NEH8 195 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF99A8MXY4 864 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 FTCDNL1E5RQL4 147 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF432O94892 652 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms