RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FUZQ9BT04 418 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 CALHM2Q9HA72 323 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 MAN2C1Q9NTJ4 1040 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 RPS6KB2Q9UBS0 482 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 SLC13A4Q9UKG4 626 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 BAG5Q9UL15 447 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 A4GNTQ9UNA3 340 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 LYVE1Q9Y5Y7 322 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 ENPP4Q9Y6X5 453 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 LRBAP50851 2863 aa7.04□□□□□ -1.28
CCDC40-215ENST00000576033 AKAP9Q99996 3911 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 VPS13CQ709C8 3753 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 POLQO75417 2590 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 LIPT2A6NK58 231 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ELOA3DA6NLF2 546 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ZNF716A6NP11 495 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 FTCDNL1E5RQL4 147 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 SS18L1O75177 396 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 RCBTB2O95199 551 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 TNFAIP8O95379 198 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 SYNGR4O95473 234 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 CGAP01215 116 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 IL2RAP01589 272 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 GNAO1P09471 354 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ITGA2P17301 1181 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 RHCEP18577 417 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 CXCR1P25024 350 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 CTSSP25774 331 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 PTGER4P35408 488 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 IDUAP35475 653 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 SMSP52788 366 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 FOXG1P55316 489 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 TAS2R41P59536 307 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 RPS3AP61247 264 aaKnown RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 IL18R1Q13478 541 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 EXOC3L2Q2M3D2 409 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ELOA3BQ3SY89 546 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 OTUD3Q5T2D3 398 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 C1orf140Q5VVS0 124 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ANKRD34AQ69YU3 496 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 TMEM211Q6ICI0 200 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ZNF770Q6IQ21 691 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 TMEM154Q6P9G4 183 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ZNF474Q6S9Z5 364 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 TMPPEQ6ZT21 453 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 C22orf34Q6ZV56 151 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 CHMP1BQ7LBR1 199 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 MAMDC2Q7Z304 686 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 RANBP3LQ86VV4 465 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 LSMEM1Q8N8F7 131 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ELOA3Q8NG57 546 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 RASSF5Q8WWW0 418 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 PROX1Q92786 737 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 SLC25A36Q96CQ1 311 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 SLC41A3Q96GZ6 507 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 CNBD2Q96M20 576 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 PITX2Q99697 317 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 PIP5K1AQ99755 562 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ZNF559Q9BR84 538 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 YTHDF1Q9BYJ9 559 aaKnown RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 PRRG4Q9BZD6 226 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 TOR3AQ9H497 397 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 REEP1Q9H902 201 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 SMURF2Q9HAU4 748 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 MEPEQ9NQ76 525 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 SERINC1Q9NRX5 453 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 C20orf141Q9NUB4 165 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 FAM118AQ9NWS6 357 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 KLHL28Q9NXS3 571 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 GALNT8Q9NY28 637 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 COQ3Q9NZJ6 369 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 PRSS50Q9UI38 385 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 SCOCQ9UIL1 159 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ZNF175Q9Y473 711 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ANKHD1Q8IWZ3 2542 aaKnown RBP7.03□□□□□ -1.28
CCDC40-215ENST00000576033 PRR14LQ5THK1 2151 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 ITPR2Q14571 2701 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 APCP25054 2843 aa7.03□□□□□ -1.28
CCDC40-215ENST00000576033 A0A087WUJ7 227 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 DPPA5A6NC42 116 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 GJE1A6NN92 205 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 ENO4A6NNW6 628 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 HSPB2A8KAH6 182 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 LINC01387J3KSC0 135 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 M0R082 166 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 GNGT2O14610 69 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF208O43345 1280 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 CHP2O43745 196 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 CYTIPO60759 359 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 E2F6O75461 281 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 PMS2P2O95744 297 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 BGLAPP02818 100 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 PNMTP11086 282 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 HLA-DOBP13765 273 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 PRF1P14222 555 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 GRPRP30550 384 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 RRM2P31350 389 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 UQCRC1P31930 480 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 DAPP51397 102 aa7.02□□□□□ -1.29
CCDC40-215ENST00000576033 GTF2A1P52655 376 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms