RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C5orf46Q6UWT4 87 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 CASP12Q6UXS9 341 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 CBLL1Q75N03 491 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ARPINQ7Z6K5 226 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 GTF2IRD2Q86UP8 949 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 MYPOPQ86VE0 399 aaPredicted RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 RANBP3LQ86VV4 465 aaPredicted RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 NKAIN4Q8IVV8 208 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 FITM2Q8N6M3 262 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 SCAIQ8N9R8 606 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 PCYOX1LQ8NBM8 494 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ELOA3Q8NG57 546 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 KISS1RQ969F8 398 aaPredicted RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 APH1AQ96BI3 265 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ZNF837Q96EG3 531 aaPredicted RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 SLC47A1Q96FL8 570 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ZC3HAV1LQ96H79 300 aaKnown RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 ALKBH3Q96Q83 286 aaPredicted RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 FUZQ9BT04 418 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 FAM107BQ9H098 131 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ARMC7Q9H6L4 198 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 C20orf141Q9NUB4 165 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 MRPL39Q9NYK5 338 aaKnown RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 CD300AQ9UGN4 299 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 SLC7A7Q9UM01 511 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 RCE1Q9Y256 329 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 PLEKHA6Q9Y2H5 1048 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 NOSIPQ9Y314 301 aaKnown RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 USF3Q68DE3 2245 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 HEATR1Q9H583 2144 aaKnown RBP7.61□□□□□ -1.19
SMG6-216ENST00000575176 TRAPPC13A5PLN9 417 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 DPRXA6NFQ7 191 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 SHISA9B4DS77 424 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 J3KTA2 159 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 PIP5K1CO60331 668 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 RAD51DO75771 328 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 OR5F1O95221 314 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 IGF2P01344 180 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 T-ENOLP0DO92 83 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 PSME3P61289 254 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 RPS4XP62701 263 aaKnown RBP7.61□□□□□ -1.19
SMG6-216ENST00000575176 PIN1Q13526 163 aaPredicted RBP7.61□□□□□ -1.19
SMG6-216ENST00000575176 MMEL1Q495T6 779 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 LRRC23Q53EV4 343 aaPredicted RBP7.61□□□□□ -1.19
SMG6-216ENST00000575176 NCMAPQ5T1S8 102 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 ADAM5Q6NVV9 412 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 B3GLCTQ6Y288 498 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 BHLHA15Q7RTS1 189 aaPredicted RBP7.61□□□□□ -1.19
SMG6-216ENST00000575176 STK32CQ86UX6 486 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 OFCC1Q8IZS5 231 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 LRRC17Q8N6Y2 441 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 FAM156AQ8NDB6 213 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 C1orf162Q8NEQ5 155 aaPredicted RBP7.61□□□□□ -1.19
SMG6-216ENST00000575176 STEAP2Q8NFT2 490 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 PFN4Q8NHR9 129 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 TMEM255BQ8WV15 326 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 LIPHQ8WWY8 451 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 NEUROG1Q92886 237 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 ZHX1-C8orf76Q96EF9 292 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 PIK3IP1Q96FE7 263 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 C7orf34Q96L11 122 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 MUS81Q96NY9 551 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 OR2M2Q96R28 347 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 SEPHS2Q99611 448 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 FOXC2Q99958 501 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 SH3GL1Q99961 368 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 HOPXQ9BPY8 73 aaPredicted RBP7.61□□□□□ -1.19
SMG6-216ENST00000575176 ECSITQ9BQ95 431 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 LINC00470Q9BZP3 86 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 SLCO5A1Q9H2Y9 848 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 DLL4Q9NR61 685 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 CCM2LQ9NUG4 571 aaPredicted RBP7.61□□□□□ -1.19
SMG6-216ENST00000575176 GID8Q9NWU2 228 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 TAS2R16Q9NYV7 291 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 TAS2R5Q9NYW4 299 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 ZNF224Q9NZL3 707 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 NDRG3Q9UGV2 375 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 RASD1Q9Y272 281 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 B3GALT5Q9Y2C3 310 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 ARL2BPQ9Y2Y0 163 aa7.61□□□□□ -1.19
SMG6-216ENST00000575176 NAV3Q8IVL0 2385 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 RPL36A-HNRNPH2H7BZ11 118 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 CXCR6O00574 342 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 PLPP3O14495 311 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 MRPL33O75394 65 aaKnown RBP7.6□□□□□ -1.19
SMG6-216ENST00000575176 VAMP5O95183 116 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 FAM107AO95990 144 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 RAF1P04049 648 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 DANCRP0C864 163 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 HSD17B1P14061 328 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 NCK1P16333 377 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 ZNF26P17031 533 aaPredicted RBP7.6□□□□□ -1.19
SMG6-216ENST00000575176 FUT1P19526 365 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 SELENOWP63302 87 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 BSPH1Q075Z2 132 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 FAPQ12884 760 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 BEX5Q5H9J7 111 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 TIMM23BQ5SRD1 257 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 ZNF704Q6ZNC4 412 aaPredicted RBP7.6□□□□□ -1.19
SMG6-216ENST00000575176 ZNF627Q7L945 461 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms