RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 Q8NA96 180 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 OR2V1Q8NHB1 315 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 UBE2FQ969M7 185 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 ADGRG7Q96K78 797 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 SRXN1Q9BYN0 137 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 ITPR1Q14643 2758 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 BHLHE40O14503 412 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 FZD7O75084 574 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 ACTL6AO96019 429 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 IGHG3P01860 377 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 F13BP05160 661 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 ZNF708P17019 499 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 ANKDD1AQ495B1 522 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 C12orf73Q69YU5 71 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 C8orf59Q8N0T1 100 aaPredicted RBP21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 TMEM99Q8N816 258 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 APOL4Q9BPW4 351 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 ADAM18Q9Y3Q7 739 aa21.55■■□□□ 1.04
ATPAF1-213ENST00000574428 ACACBO00763 2458 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 ZNF814B7Z6K7 855 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 OR6A2O95222 327 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 AHCYP23526 432 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 EIF1AXP47813 144 aaKnown RBP21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 MLLT10P55197 1068 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 CSNK2A1P68400 391 aaPredicted RBP21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 IL18R1Q13478 541 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 C3AR1Q16581 482 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 VASNQ6EMK4 673 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 KDM8Q8N371 416 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 LRRC75AQ8NAA5 344 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 OR10D3Q8NH80 312 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 KATNB1Q9BVA0 655 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 MYRFQ9Y2G1 1151 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 ZNF407Q9C0G0 2248 aa21.54■■□□□ 1.04
ATPAF1-213ENST00000574428 RNF13O43567 381 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 SERPINI2O75830 405 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 CARD18P57730 90 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 CDC42P60953 191 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 IL5RAQ01344 420 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 APOFQ13790 326 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 CASP12Q6UXS9 341 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 MRPS26Q9BYN8 205 aaKnown RBP21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 IMPAD1Q9NX62 359 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 TVP23BQ9NYZ1 205 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 AASSQ9UDR5 926 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 IGHV3-15A0A0B4J1V0 119 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 CXCL13O43927 109 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 ERVK-25P63136 954 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 HSF1Q00613 529 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 PUDPQ08623 228 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 SLC35F1Q5T1Q4 408 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 DPY19L2P2Q6ZN68 376 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 SLC43A2Q8N370 569 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 ZNF786Q8N393 782 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 LNX2Q8N448 690 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 SETD9Q8NE22 299 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 GPX7Q96SL4 187 aaPredicted RBP21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 TIMP4Q99727 224 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 RASSF1Q9NS23 344 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 RNF6Q9Y252 685 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 B3GALT5Q9Y2C3 310 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 PKD1L2Q7Z442 2459 aa21.53■■□□□ 1.04
ATPAF1-213ENST00000574428 SPENQ96T58 3664 aaKnown RBP21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 MS4A18H0YCH9 400 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 ZNHIT1O43257 154 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 RAMP1O60894 148 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 PLGP00747 810 aaPredicted RBP21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 CRYABP02511 175 aaKnown RBP21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 P2RY4P51582 365 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 CTXN1P60606 82 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 ISL1P61371 349 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 MS4A18Q3C1V0 323 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 PAQR6Q6TCH4 344 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 FAM180AQ6UWF9 173 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 CCDC103Q8IW40 242 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 ENTHD1Q8IYW4 607 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 MEIOBQ8N635 442 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 ZNF845Q96IR2 970 aaPredicted RBP21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 ERMAPQ96PL5 475 aaPredicted RBP21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 UCN2Q96RP3 112 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 NRIP3Q9NQ35 241 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 IER3IP1Q9Y5U9 82 aa21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 PRRC2CQ9Y520 2896 aaKnown RBP21.52■■□□□ 1.04
ATPAF1-213ENST00000574428 AQP7P3A6NL99 342 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 RAC3P60763 192 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 TOP3AQ13472 1001 aaPredicted RBP21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 BCL2A1Q16548 175 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 THAP5Q7Z6K1 395 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 IL4I1Q96RQ9 567 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 POLDIP3Q9BY77 421 aaKnown RBP21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 NDEL1Q9GZM8 345 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 INIPQ9NRY2 104 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 ZNF226Q9NYT6 803 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 PRKYO43930 277 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 SLC2A10O95528 541 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 CD14P08571 375 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 HLA-DOBP13765 273 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 GRK5P34947 590 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 RPS6KA3P51812 740 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 H3F3AP84243 136 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms