RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 OR2G6Q5TZ20 316 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 GPR157Q5UAW9 335 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ZNF772Q68DY9 489 aaPredicted RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 PDPK2PQ6A1A2 396 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ERICH5Q6P6B1 374 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 Q6ZSR3 168 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ACOT7LQ6ZUV0 252 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FRA10AC1Q70Z53 315 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 GDPD3Q7L5L3 318 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 TIPARPQ7Z3E1 657 aaKnown RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 PLA2G4DQ86XP0 818 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 LRRC49Q8IUZ0 686 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 NRMQ8IXM6 262 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 GPR65Q8IYL9 337 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ST13P4Q8IZP2 240 aaPredicted RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 IQCKQ8N0W5 287 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 JAGN1Q8N5M9 183 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 MS4A15Q8N5U1 240 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ACOT4Q8N9L9 421 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FNDC5Q8NAU1 212 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 INO80EQ8NBZ0 244 aaPredicted RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 ZNF248Q8NDW4 579 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FBXL13Q8NEE6 735 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 OR4A15Q8NGL6 344 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 OR1S2Q8NGQ3 325 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 OR2G2Q8NGZ5 317 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 OR52E5Q8NH55 327 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 LYPD6BQ8NI32 183 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FLVCR1-AS1Q8TAF5 88 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SUN5Q8TC36 379 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 NPRL2Q8WTW4 380 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FGF11Q92914 225 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 NAT6Q93015 286 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 CMTM7Q96FZ5 175 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 PAGE5Q96GU1 130 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ZBED3Q96IU2 234 aaPredicted RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 HSFY1Q96LI6 401 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 C9orf72Q96LT7 481 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 MS4A4EQ96PG1 132 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 CSPG4P5Q96PW8 444 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SORT1Q99523 831 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 MCHR1Q99705 422 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SH3GL1Q99961 368 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 MRPL45Q9BRJ2 306 aaKnown RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 CHCHD5Q9BSY4 110 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SYT11Q9BT88 431 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FAIM2Q9BWQ8 316 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 PRRG3Q9BZD7 231 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 OCR1Q9BZK8 76 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ZYG11BQ9C0D3 744 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 NMUR2Q9GZQ4 415 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 UPF3AQ9H1J1 476 aaKnown RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 PIGUQ9H490 435 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FOLH1BQ9HBA9 442 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SPACA1Q9HBV2 294 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 TMEM165Q9HC07 324 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FGF20Q9NP95 211 aaPredicted RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 IMPAD1Q9NX62 359 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 STAP1Q9ULZ2 295 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 DDX19BQ9UMR2 479 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SLC17A4Q9Y2C5 497 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 PLLPQ9Y342 182 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 CDHR2Q9BYE9 1310 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 AKNAQ7Z591 1439 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 IGLV7-46A0A075B6I9 117 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 TRAV6A0A075B6T7 132 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 KRTAP9-6A0A140TA67 174 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 MEX3AA1L020 520 aaKnown RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 EFCAB7A8K855 629 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 IQCF5A8MTL0 148 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 KRTAP9-7A8MTY7 169 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 A8MUA0 341 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 PDZK1P1A8MUH7 402 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ZNF705EA8MWA4 302 aaPredicted RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 A8MXK9 166 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 FAM220BPB1ANY3 271 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ZNF487B1APH4 448 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 LOC110117498-PIK3R3F6TDL0 507 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 NR5A2O00482 541 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 CCL21O00585 134 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 SLC17A2O00624 439 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 MBTPS2O43462 519 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 IDH3BO43837 385 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 EIF4E2O60573 245 aaKnown RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 HSBP1O75506 76 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 ZFAND5O76080 213 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 FARS2O95363 451 aaKnown RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 SLC2A10O95528 541 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 CLIC3O95833 236 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 CD160O95971 181 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 RENP00797 406 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 IGLV1-44P01699 117 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 HLA-HP01893 362 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 AMBPP02760 352 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 FGF1P05230 155 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 KLK3P07288 261 aaPredicted RBP1.68□□□□□ -2.14
CHD3-217ENST00000574022 CDK4P11802 303 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 NR2C1P13056 603 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 PMCHP20382 165 aa1.68□□□□□ -2.14
CHD3-217ENST00000574022 NPR2P20594 1047 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms