RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	POLR2H	P52434	150 aa	Known RBP	12.83	□□□□□ -0.36
ABR-223	ENST00000573895	CARD18	P57730	90 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	TOMM34	Q15785	309 aa	Predicted RBP	12.83	□□□□□ -0.36
ABR-223	ENST00000573895	EXOC3L2	Q2M3D2	409 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	FGD3	Q5JSP0	725 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	PPP4R4	Q6NUP7	873 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	VWA1	Q6PCB0	445 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	PODNL1	Q6PEZ8	512 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	BTLA	Q7Z6A9	289 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	STK32C	Q86UX6	486 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	TSPYL5	Q86VY4	417 aa	Predicted RBP	12.83	□□□□□ -0.36
ABR-223	ENST00000573895	CNEP1R1	Q8N9A8	125 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	SLC7A13	Q8TCU3	470 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	OSTF1	Q92882	214 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	CPNE4	Q96A23	557 aa	Predicted RBP	12.83	□□□□□ -0.36
ABR-223	ENST00000573895	C3orf49	Q96BT1	292 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	SLC19A3	Q9BZV2	496 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	KLHL4	Q9C0H6	718 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	VCX	Q9H320	206 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	GP6	Q9HCN6	339 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.83	□□□□□ -0.36
ABR-223	ENST00000573895	CTPS2	Q9NRF8	586 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	MAN2C1	Q9NTJ4	1040 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	VNN3	Q9NY84	501 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	OAZ3	Q9UMX2	235 aa		12.83	□□□□□ -0.36
ABR-223	ENST00000573895	TRBV4-1	A0A0J9YWV2	114 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	SAC3D1	A6NKF1	404 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	ELOA3D	A6NLF2	546 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-223	ENST00000573895		A6NNC1	897 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895		H0YJX3	145 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	CXCL13	O43927	109 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	SS18L1	O75177	396 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-223	ENST00000573895	IGF2	P01344	180 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	THY1	P04216	161 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	CXCR1	P25024	350 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	TACR3	P29371	465 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	VHL	P40337	213 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	IST1	P53990	364 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	SNTB1	Q13884	538 aa	Known RBP	12.82	□□□□□ -0.36
ABR-223	ENST00000573895	ELOA3B	Q3SY89	546 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	C3orf33	Q6P1S2	294 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	TTC33	Q6PID6	262 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-223	ENST00000573895	C5orf46	Q6UWT4	87 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF730	Q6ZMV8	503 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	TMEM179B	Q7Z7N9	219 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	ATG4D	Q86TL0	474 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-223	ENST00000573895	CDK20	Q8IZL9	346 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	ELOA3	Q8NG57	546 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	OR6K3	Q8NGY3	331 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	RNF217	Q8TC41	542 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	TMEM239	Q8WW34	195 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	DNAJC9	Q8WXX5	260 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	DACH2	Q96NX9	599 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	CIB1	Q99828	191 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	RBM4B	Q9BQ04	359 aa	Known RBP	12.82	□□□□□ -0.36
ABR-223	ENST00000573895	PRSS27	Q9BQR3	290 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	TMEM43	Q9BTV4	400 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF426	Q9BUY5	554 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	RBM4	Q9BWF3	364 aa	Known RBP	12.82	□□□□□ -0.36
ABR-223	ENST00000573895	GABARAPL1	Q9H0R8	117 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	TMEM185B	Q9H7F4	350 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	COQ10B	Q9H8M1	238 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	PLSCR4	Q9NRQ2	329 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	SERINC1	Q9NRX5	453 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	RASSF1	Q9NS23	344 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	PDP1	Q9P0J1	537 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-223	ENST00000573895	NDRG3	Q9UGV2	375 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	MGAT4B	Q9UQ53	548 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895	EMC9	Q9Y3B6	208 aa		12.82	□□□□□ -0.36
ABR-223	ENST00000573895		A0A087WUU8	490 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
ABR-223	ENST00000573895	PLG	P00747	810 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-223	ENST00000573895	OPN1LW	P04000	364 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	SFTPD	P35247	375 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	CD79B	P40259	229 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	CTBP2	P56545	445 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	RAC3	P60763	192 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	MERTK	Q12866	999 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	RNPS1	Q15287	305 aa	Known RBP	12.81	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF239	Q16600	458 aa	Known RBP	12.81	□□□□□ -0.36
ABR-223	ENST00000573895	TMEM176B	Q3YBM2	270 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-223	ENST00000573895	LPCAT4	Q643R3	524 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF474	Q6S9Z5	364 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-223	ENST00000573895	MBOAT2	Q6ZWT7	520 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	TMEM200A	Q86VY9	491 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	NKAIN4	Q8IVV8	208 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	CBR4	Q8N4T8	237 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	OR10G2	Q8NGC3	310 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	OR4K5	Q8NGD3	323 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	RNF128	Q8TEB7	428 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	SLC25A43	Q8WUT9	341 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-223	ENST00000573895	NRG4	Q8WWG1	115 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF524	Q96C55	264 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	ZNF556	Q9HAH1	456 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	USE1	Q9NZ43	259 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	OSGIN1	Q9UJX0	560 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	PROCR	Q9UNN8	238 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	TMEM5	Q9Y2B1	443 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	MED31	Q9Y3C7	131 aa		12.81	□□□□□ -0.36
ABR-223	ENST00000573895	FREM1	Q5H8C1	2179 aa		12.81	□□□□□ -0.36

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