RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 CARTPTQ16568 116 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 EPHX4Q8IUS5 362 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 ARIH2OSQ8N7S6 290 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 HPS1Q92902 700 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 ALKBH3Q96Q83 286 aaPredicted RBP13.51□□□□□ -0.25
TSR1-202ENST00000571806 CHODLQ9H9P2 273 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 TPT1P8Q9HAU6 139 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 C12orf10Q9HB07 376 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 KCNK9Q9NPC2 374 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 THAP1Q9NVV9 213 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 PCDHB14Q9Y5E9 798 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 ARFGEF3Q5TH69 2177 aa13.51□□□□□ -0.25
TSR1-202ENST00000571806 IGHV4-61A0A0C4DH41 118 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 TMEM229AB2RXF0 380 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 SLC43A1O75387 559 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 GIFP27352 417 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 ARR3P36575 388 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 CHN2P52757 468 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 MVDP53602 400 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 ROR2Q01974 943 aaKnown RBP13.5□□□□□ -0.25
TSR1-202ENST00000571806 PDCD4Q53EL6 469 aaKnown RBP13.5□□□□□ -0.25
TSR1-202ENST00000571806 C3orf49Q96BT1 292 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 ITCHQ96J02 903 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 OXGR1Q96P68 337 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 C19orf24Q9BVV8 132 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 RAD21L1Q9H4I0 556 aa13.5□□□□□ -0.25
TSR1-202ENST00000571806 LOC102725191A0A1B0GVB3 256 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 SLC35F4A4IF30 521 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 FTCDNL1E5RQL4 147 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 AKAP8O43823 692 aaKnown RBP13.49□□□□□ -0.25
TSR1-202ENST00000571806 UPK3AO75631 287 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 ZNF432O94892 652 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 PNMTP11086 282 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 ETFAP13804 333 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 NPR2P20594 1047 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 EPHA3P29320 983 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 CLDN17P56750 224 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 POU3F1Q03052 451 aaPredicted RBP13.49□□□□□ -0.25
TSR1-202ENST00000571806 TNFAIP8L3Q5GJ75 292 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 ZNF311Q5JNZ3 666 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 HHATQ5VTY9 493 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 VHLLQ6RSH7 139 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 NET1Q7Z628 596 aaPredicted RBP13.49□□□□□ -0.25
TSR1-202ENST00000571806 CLIP4Q8N3C7 705 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 GPR137CQ8N3F9 429 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 ANKS4BQ8N8V4 417 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 PIK3C3Q8NEB9 887 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 SLC25A36Q96CQ1 311 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 PAIP2Q9BPZ3 127 aaKnown RBP13.49□□□□□ -0.25
TSR1-202ENST00000571806 BPESC1Q9GZL8 116 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 BCL2L10Q9HD36 194 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 ZIM2Q9NZV7 527 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 SVEP1Q4LDE5 3571 aa13.49□□□□□ -0.25
TSR1-202ENST00000571806 A0A096LPE4 126 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 A0A1W2PPZ6 126 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 NR5A2O00482 541 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 AIM2O14862 343 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 FZD7O75084 574 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 STAMBPO95630 424 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 TACSTD2P09758 323 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 PRG2P13727 222 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 DAOP14920 347 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 PCMT1P22061 227 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 RPS5P46782 204 aaKnown RBP13.48□□□□□ -0.25
TSR1-202ENST00000571806 FADDQ13158 208 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 C1DQ13901 141 aaKnown RBP13.48□□□□□ -0.25
TSR1-202ENST00000571806 MPP2Q14168 576 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 MFSD13AQ14CX5 517 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 FAM69AQ5T7M9 428 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 ATG16L1Q676U5 607 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 C6orf89Q6UWU4 347 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 LINGO2Q7L985 606 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 SERPINA11Q86U17 422 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 TMEM19Q96HH6 336 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 DOK1Q99704 481 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 NELFAQ9H3P2 528 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 CENPHQ9H3R5 247 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 WDR55Q9H6Y2 383 aaPredicted RBP13.48□□□□□ -0.25
TSR1-202ENST00000571806 RPS6KB2Q9UBS0 482 aa13.48□□□□□ -0.25
TSR1-202ENST00000571806 hCG_2039718K7EN88 272 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 SNNO75324 88 aaPredicted RBP13.47□□□□□ -0.25
TSR1-202ENST00000571806 CALCRP30988 508 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 EVX1P49640 407 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 ARF1P84077 181 aaKnown RBP13.47□□□□□ -0.25
TSR1-202ENST00000571806 EGR4Q05215 589 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 LGALS3BPQ08380 585 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 NXNQ6DKJ4 435 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 ZNF786Q8N393 782 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 RFLNBQ8N5W9 214 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 LSMEM1Q8N8F7 131 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 BBS10Q8TAM1 723 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 DNAJA4Q8WW22 397 aaPredicted RBP13.47□□□□□ -0.25
TSR1-202ENST00000571806 SLC38A4Q969I6 547 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 MAELQ96JY0 434 aaKnown RBP13.47□□□□□ -0.25
TSR1-202ENST00000571806 PTDSS2Q9BVG9 487 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 GPR35Q9HC97 309 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 SDR39U1Q9NRG7 319 aaPredicted RBP13.47□□□□□ -0.25
TSR1-202ENST00000571806 SLC6A13Q9NSD5 602 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 USP22Q9UPT9 525 aa13.47□□□□□ -0.25
TSR1-202ENST00000571806 CHST2Q9Y4C5 530 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms