RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 NIPAL3Q6P499 406 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 LINGO4Q6UY18 593 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 NDUFAF7Q7L592 441 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 PEX26Q7Z412 305 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 DCXRQ7Z4W1 244 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 TRPT1Q86TN4 253 aaKnown RBP3.12□□□□□ -1.91
CDC27-213ENST00000571643 NT5DC3Q86UY8 548 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 VRK2Q86Y07 508 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 TMEM139Q8IV31 216 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 NUDCD3Q8IVD9 361 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 LRRC8AQ8IWT6 810 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 RYBPQ8N488 228 aaPredicted RBP3.12□□□□□ -1.91
CDC27-213ENST00000571643 GATSQ8NAP1 163 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 SIDT2Q8NBJ9 832 aaKnown RBP3.12□□□□□ -1.91
CDC27-213ENST00000571643 OR7G1Q8NGA0 311 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 OR13C9Q8NGT0 318 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 OR4A16Q8NH70 328 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 OR14L1PQ8NHC6 308 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 GRHL3Q8TE85 626 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 OSTF1Q92882 214 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 SPDL1Q96EA4 605 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 SERAC1Q96JX3 654 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 OLFM3Q96PB7 478 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 MCCC1Q96RQ3 725 aaPredicted RBP3.12□□□□□ -1.91
CDC27-213ENST00000571643 RAB40CQ96S21 281 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 RASL10BQ96S79 203 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 SH3GL3Q99963 347 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 RBM4BQ9BQ04 359 aaKnown RBP3.12□□□□□ -1.91
CDC27-213ENST00000571643 FNDC11Q9BVV2 318 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 SLC17A9Q9BYT1 436 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 WWTR1Q9GZV5 400 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 MFFQ9GZY8 342 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 RAB6CQ9H0N0 254 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 SLC25A51Q9H1U9 297 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 GAL3ST2Q9H3Q3 398 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 SAV1Q9H4B6 383 aaPredicted RBP3.12□□□□□ -1.91
CDC27-213ENST00000571643 TRABDQ9H4I3 376 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 MRM3Q9HC36 420 aaKnown RBP3.12□□□□□ -1.91
CDC27-213ENST00000571643 ZBTB20Q9HC78 741 aaPredicted RBP3.12□□□□□ -1.91
CDC27-213ENST00000571643 GDF3Q9NR23 364 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 GPR173Q9NS66 373 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 STOX2Q9P2F5 926 aaPredicted RBP3.12□□□□□ -1.91
CDC27-213ENST00000571643 LHX3Q9UBR4 397 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 ASIC3Q9UHC3 531 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 PSMD13Q9UNM6 376 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 FOXJ3Q9UPW0 622 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 SATB2Q9UPW6 733 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 RNF24Q9Y225 148 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 PIGLQ9Y2B2 252 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 FADS3Q9Y5Q0 445 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 ANKRD36A6QL64 1941 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 PCDH15Q96QU1 1955 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 GVINP1Q7Z2Y8 2422 aa3.12□□□□□ -1.91
CDC27-213ENST00000571643 PCNX2A6NKB5 2137 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 hCG_1818297A0A087WSY0 165 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 IGKV3D-20A0A0C4DH25 116 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 GOLGA8QA0A0J9YX86 632 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 SPTY2D1-AS1A0A0U1RR47 76 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 OR2AG2A6NM03 316 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 OR5K4A6NMS3 321 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 EIF4E1BA6NMX2 242 aaKnown RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 CENPBD1B2RD01 187 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 APOC4-APOC2K7ER74 178 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 DFFAO00273 331 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 TRAFD1O14545 582 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 PSMD3O43242 534 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 ZSCAN12O43309 604 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 CST8O60676 142 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 GLRA3O75311 464 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 UPK3AO75631 287 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 SCGNO76038 276 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 TM7SF2O76062 418 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 CCNB2O95067 398 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 TBX6O95947 436 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 APOC2P02655 101 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 FTH1P02794 183 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 PROS1P07225 676 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 CRYGBP07316 175 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 CTSLP07711 333 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 SFTPBP07988 381 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 ANKRD34CP0C6C1 535 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 PRSS56P0CW18 603 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 TCN1P20061 433 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 ZNF10P21506 573 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 CD40LGP29965 261 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 LCN1P31025 176 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 OTX1P32242 354 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 CD80P33681 288 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 MMP12P39900 470 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 PTGFRP43088 359 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 DUSP3P51452 185 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 CCR4P51679 360 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 DCDC1P59894 354 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 PFN3P60673 137 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 HNRNPKP61978 463 aaKnown RBP eCLIP3.11□□□□□ -1.91
CDC27-213ENST00000571643 CDK3Q00526 305 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 LGALS3BPQ08380 585 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 SLC10A7Q0GE19 358 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 ITGA9Q13797 1035 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 GK2Q14410 553 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms