RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SEMA4GQ9NTN9 838 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 ARMC1Q9NVT9 282 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 SLCO1C1Q9NYB5 712 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 PTGFRNQ9P2B2 879 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 CES1P1Q9UKY3 287 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 MMACHCQ9Y4U1 282 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 U3KQA8 63 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 SNRNP200O75643 2136 aaKnown RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 NUP210LQ5VU65 1888 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 A0A0G2JN53 185 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 A0A1B0GX78 115 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 DHRS12A0PJE2 317 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 DUXAA6NLW8 204 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 TMEM150CB9EJG8 249 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 D6RAR5 112 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 PLOD2O00469 737 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 CXCR6O00574 342 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 CYR61O00622 381 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 NTN3O00634 580 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-222ENST00000570139 EMC8O43402 210 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 FCGR3BO75015 233 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 PROP1O75360 226 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 PDE9AO76083 593 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 GPR75O95800 540 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 TCN1P20061 433 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-222ENST00000570139 SELENOVP59797 346 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 HTD2P86397 168 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 ZNF91Q05481 1191 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 FOXF2Q12947 444 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 SERTAD2Q14140 314 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 RGNQ15493 299 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 EFNB3Q15768 340 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 SGCBQ16585 318 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 DEFB110Q30KQ9 67 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 IFI44LQ53G44 452 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 GCNT6Q5T4J0 391 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 PRAMEF8Q5VWM4 474 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 PRAMEF7Q5VXH5 474 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 NKAIN2Q5VXU1 208 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 SAXO2Q658L1 398 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 GLYATQ6IB77 296 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 ZCCHC12Q6PEW1 402 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 ANGPTL8Q6UXH0 198 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 TTLL10Q6ZVT0 673 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 TMPRSS11FQ6ZWK6 438 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 ARHGAP22Q7Z5H3 698 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 IFNEQ86WN2 208 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 Q8N9G6 341 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-222ENST00000570139 MIPOL1Q8TD10 442 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 ZNF675Q8TD23 568 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 IGFBPL1Q8WX77 278 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 CIDECQ96AQ7 238 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-222ENST00000570139 CNRIP1Q96F85 164 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-222ENST00000570139 SLC45A3Q96JT2 553 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 SLC35G5Q96KT7 338 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 C10orf90Q96M02 699 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 ZNF681Q96N22 645 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 LMF2Q9BU23 707 aaKnown RBP6.4□□□□□ -1.38
CNOT1-222ENST00000570139 VCXQ9H320 206 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 GLIPR2Q9H4G4 154 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 TMEM9BQ9NQ34 198 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 CUTCQ9NTM9 273 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 ZCCHC3Q9NUD5 404 aaKnown RBP6.4□□□□□ -1.38
CNOT1-222ENST00000570139 RHCGQ9UBD6 479 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 RNF150Q9ULK6 438 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 FAF1Q9UNN5 650 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-222ENST00000570139 ANGPT4Q9Y264 503 aa6.4□□□□□ -1.38
CNOT1-222ENST00000570139 RPH3AQ9Y2J0 694 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-222ENST00000570139 ADAMTS9Q9P2N4 1935 aa6.4□□□□□ -1.39
CNOT1-222ENST00000570139 IGHV5-10-1A0A0J9YXX1 117 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 WASHC1A8K0Z3 465 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 C5orf58C9J3I9 102 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 H3BMH7 237 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 RDH16O75452 317 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 KRT36O76013 467 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 AK1P00568 194 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 ALPPP05187 535 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 SLC35E2P0CK97 266 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 CPMP14384 443 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 ANPEPP15144 967 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 ATP6V1B2P21281 511 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 SLC6A6P31641 620 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 CSTF2P33240 577 aaKnown RBP eCLIP6.39□□□□□ -1.39
CNOT1-222ENST00000570139 VHLP40337 213 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 CRATP43155 626 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 CCT3P49368 545 aaKnown RBP6.39□□□□□ -1.39
CNOT1-222ENST00000570139 GZMMP51124 257 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 XKP51811 444 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 P2RX3P56373 397 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 OR4D2P58180 307 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 SEC61BP60468 96 aaKnown RBP6.39□□□□□ -1.39
CNOT1-222ENST00000570139 ZP1P60852 638 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 DSTNP60981 165 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 PSPHP78330 225 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 CCL7P80098 99 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 IGLV3-21P80748 117 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-222ENST00000570139 MRPS22P82650 360 aaKnown RBP6.39□□□□□ -1.39
CNOT1-222ENST00000570139 MS4A2Q01362 244 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 SELPLGQ14242 412 aa6.39□□□□□ -1.39
CNOT1-222ENST00000570139 GK3PQ14409 553 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms