RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TMEM99Q8N816 258 aa20.95■□□□□ 0.94
RAB40C-212ENST00000569575 ATG16L2Q8NAA4 619 aa20.95■□□□□ 0.94
RAB40C-212ENST00000569575 ICA1LQ8NDH6 482 aa20.95■□□□□ 0.94
RAB40C-212ENST00000569575 ANKK1Q8NFD2 765 aa20.95■□□□□ 0.94
RAB40C-212ENST00000569575 FNDC9Q8TBE3 224 aa20.95■□□□□ 0.94
RAB40C-212ENST00000569575 TTYH2Q9BSA4 534 aa20.95■□□□□ 0.94
RAB40C-212ENST00000569575 SIGLEC7Q9Y286 467 aa20.95■□□□□ 0.94
RAB40C-212ENST00000569575 FAM215AQ9Y5M1 114 aa20.95■□□□□ 0.94
RAB40C-212ENST00000569575 BSNQ9UPA5 3926 aa20.95■□□□□ 0.94
RAB40C-212ENST00000569575 PRRC2CQ9Y520 2896 aaKnown RBP20.95■□□□□ 0.94
RAB40C-212ENST00000569575 PHF3Q92576 2039 aaKnown RBP20.94■□□□□ 0.94
RAB40C-212ENST00000569575 CASQ2O14958 399 aaPredicted RBP20.94■□□□□ 0.94
RAB40C-212ENST00000569575 UQCRC1P31930 480 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 GPR4P46093 362 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 P2RY4P51582 365 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 LSM11P83369 360 aaKnown RBP eCLIP20.94■□□□□ 0.94
RAB40C-212ENST00000569575 SLC34A1Q06495 639 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 RASGEF1BQ0VAM2 473 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 PPP1R8Q12972 351 aaKnown RBP20.94■□□□□ 0.94
RAB40C-212ENST00000569575 RTL6Q6ICC9 239 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 HDDC2Q7Z4H3 204 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 PARP8Q8N3A8 854 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 OR9Q2Q8NGE9 314 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 EME1Q96AY2 570 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 UCK2Q9BZX2 261 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 RASSF4Q9H2L5 321 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 IL20Q9NYY1 176 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 USE1Q9NZ43 259 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 KIF17Q9P2E2 1029 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 OSGIN2Q9Y236 505 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 POFUT2Q9Y2G5 429 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 ARHGAP21Q5T5U3 1957 aa20.94■□□□□ 0.94
RAB40C-212ENST00000569575 ESPL1Q14674 2120 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 TRGV8A0A0C4DH27 118 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 HSPB2A8KAH6 182 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 CDC42EP2O14613 210 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 AKAP8O43823 692 aaKnown RBP20.93■□□□□ 0.94
RAB40C-212ENST00000569575 NDUFB2O95178 105 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 HPRP00739 348 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 ADORA3P0DMS8 318 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 ZNF43P17038 809 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 CEACAM8P31997 349 aaPredicted RBP20.93■□□□□ 0.94
RAB40C-212ENST00000569575 SLC17A1Q14916 467 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 HSPB2Q16082 182 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 RFX4Q33E94 735 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 RPTNQ6XPR3 784 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 LRRC17Q8N6Y2 441 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 PACRGLQ8N7B6 248 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 PARPBPQ9NWS1 579 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 TAS2R5Q9NYW4 299 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 MEMO1Q9Y316 297 aa20.93■□□□□ 0.94
RAB40C-212ENST00000569575 MS4A18H0YCH9 400 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 BLOC1S5-TXNDC5H3BN57 136 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 TGM6O95932 706 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 IL18BPO95998 194 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 YES1P07947 543 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 APEHP13798 732 aaKnown RBP20.92■□□□□ 0.94
RAB40C-212ENST00000569575 CDH2P19022 906 aaPredicted RBP20.92■□□□□ 0.94
RAB40C-212ENST00000569575 MS4A18Q3C1V0 323 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 KDM4DQ6B0I6 523 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 SMARCD3Q6STE5 483 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 ZBTB49Q6ZSB9 765 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 UEVLDQ8IX04 471 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 ROBO4Q8WZ75 1007 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 DMRTA2Q96SC8 542 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 GPX7Q96SL4 187 aaPredicted RBP20.92■□□□□ 0.94
RAB40C-212ENST00000569575 KLHL13Q9P2N7 655 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 TINAGQ9UJW2 476 aa20.92■□□□□ 0.94
RAB40C-212ENST00000569575 ZNF716A6NP11 495 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 LRRN3E7EW58 273 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 IDH3BO43837 385 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 SS18L1O75177 396 aaPredicted RBP20.91■□□□□ 0.94
RAB40C-212ENST00000569575 AQP8O94778 261 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 PLGP00747 810 aaPredicted RBP20.91■□□□□ 0.94
RAB40C-212ENST00000569575 GLI4P10075 376 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 PTNP21246 168 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 ALDH3A2P51648 485 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 PER3P56645 1201 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 ESRRGP62508 458 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 PPP2R2BQ00005 443 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 RPL18Q07020 188 aaKnown RBP20.91■□□□□ 0.94
RAB40C-212ENST00000569575 C1DQ13901 141 aaKnown RBP20.91■□□□□ 0.94
RAB40C-212ENST00000569575 ALG10Q5BKT4 473 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 TMEM201Q5SNT2 666 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 PPP4R4Q6NUP7 873 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 DPY19L2P2Q6ZN68 376 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 OR51A7Q8NH64 312 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 TMEM45BQ96B21 275 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 ADAD1Q96M93 576 aaKnown RBP20.91■□□□□ 0.94
RAB40C-212ENST00000569575 RDH12Q96NR8 316 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 TNFRSF13CQ96RJ3 184 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 PAPOLBQ9NRJ5 636 aaKnown RBP20.91■□□□□ 0.94
RAB40C-212ENST00000569575 INIPQ9NRY2 104 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 ZNF629Q9UEG4 869 aaPredicted RBP20.91■□□□□ 0.94
RAB40C-212ENST00000569575 BAIAP2Q9UQB8 552 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 RCE1Q9Y256 329 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 EMC9Q9Y3B6 208 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 ORC6Q9Y5N6 252 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 CDH10Q9Y6N8 788 aa20.91■□□□□ 0.94
RAB40C-212ENST00000569575 A0A1W2PRG6 482 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms