RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 IL20RAQ9UHF4 553 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 IFT172Q9UG01 1749 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 NRLP54845 237 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 MRPL49Q13405 166 aaKnown RBP6.62□□□□□ -1.35
CNOT1-216ENST00000569240 GBX1Q14549 363 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 OR4C11Q6IEV9 310 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM65Q6PI78 240 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 OR6N1Q8NGY5 312 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ANKRD9Q96BM1 317 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF541Q9H0D2 1346 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 OR5K4A6NMS3 321 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ST8SIA5O15466 376 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 CRYABP02511 175 aaKnown RBP6.62□□□□□ -1.35
CNOT1-216ENST00000569240 HAAOP46952 286 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ERVK-16P61578 105 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 IHHQ14623 411 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 JAM3Q9BX67 310 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 TP53TG5Q9Y2B4 290 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 MYBPHLA2RUH7 354 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 FAM74A7A6NL05 159 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF593O00488 134 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 SNRPBP14678 240 aaKnown RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ACHEP22303 614 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 PRPH2P23942 346 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ABCD3P28288 659 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CSNK1EP49674 416 aaKnown RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 PNLIPRP3Q17RR3 467 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 LEG1Q6P5S2 330 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 TRAPPC6BQ86SZ2 158 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 SPTSSAQ969W0 71 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 DAZAP1Q96EP5 407 aaKnown RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 GMPPAQ96IJ6 420 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 NAA11Q9BSU3 229 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 GPR61Q9BZJ8 451 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ALX4Q9H161 411 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ABI3Q9P2A4 366 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 Q9Y3F1 56 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 OR1A2Q9Y585 309 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 KNDC1Q76NI1 1749 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 A0A1W2PPQ1 181 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CXorf65A6NEN9 183 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 FTCDNL1E5RQL4 147 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 GFRA2O00451 464 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF749O43361 778 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ELAVL4P26378 380 aaKnown RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 MTCP1P56278 107 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 TCTAP57738 103 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 NKPD1Q17RQ9 610 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 TP53I3Q53FA7 332 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 PABPC1L2AQ5JQF8 200 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 FIGNL1Q6PIW4 674 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 TMPPEQ6ZT21 453 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CSNK1A1LQ8N752 337 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 OR9A4Q8NGU2 314 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ACPTQ9BZG2 426 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF442Q9H7R0 627 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 RAB18Q9NP72 206 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 DEC1Q9P2X7 70 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 KCNK7Q9Y2U2 307 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 GSTP1P09211 210 aaKnown RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 SFTA3P0C7M3 94 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 OR5H8P0DN80 308 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 LAG3P18627 525 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 SRMP19623 302 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 GPR4P46093 362 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 PCP4P48539 62 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 SYT14P1Q58G82 188 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 DPY19L2P2Q6ZN68 376 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 REC114Q7Z4M0 266 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CLECL1Q8IZS7 167 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 SLC26A10Q8NG04 563 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 OR51T1Q8NGJ9 327 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ARHGDIGQ99819 225 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 C1orf198Q9H425 327 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 RRAGCQ9HB90 399 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 PLSCR3Q9NRY6 295 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 TAC3Q9UHF0 121 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 SLC38A8A6NNN8 435 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CFHP08603 1231 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 FBP1P09467 338 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 HOXC12P31275 282 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 EMC4Q5J8M3 183 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 LBX2Q6XYB7 198 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 BPIFCQ8NFQ6 507 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 DPH1Q9BZG8 443 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CTSFQ9UBX1 484 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 GABRR3A8MPY1 467 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 M0R3H8 397 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 SULT2B1O00204 365 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CBR1P16152 277 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 DHODHQ02127 395 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 MBTPS1Q14703 1052 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF626Q68DY1 528 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF534Q76KX8 674 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 OR2W3Q7Z3T1 314 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CCDC116Q8IYX3 515 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 GABRG1Q8N1C3 465 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ARHGEF39Q8N4T4 335 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 OR2G3Q8NGZ4 309 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms