RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 KLF11O14901 512 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 SLC43A1O75387 559 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 PNMTP11086 282 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 ETS2P15036 469 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 C1DQ13901 141 aaKnown RBP16.26■□□□□ 0.19
LINC01238-205ENST00000567549 RGNQ15493 299 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 TBRG1Q3YBR2 411 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 NIPAL3Q6P499 406 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 B3GLCTQ6Y288 498 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 SLC46A3Q7Z3Q1 461 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 SNX32Q86XE0 403 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 ZNF525Q8N782 197 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 OR1K1Q8NGR3 316 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 C10orf105Q8TEF2 133 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 DNAJA4Q8WW22 397 aaPredicted RBP16.26■□□□□ 0.19
LINC01238-205ENST00000567549 SLC38A4Q969I6 547 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 C3orf49Q96BT1 292 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 FBXO17Q96EF6 278 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 REPIN1Q9BWE0 567 aaKnown RBP16.26■□□□□ 0.19
LINC01238-205ENST00000567549 BEX2Q9BXY8 128 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 NSRP1Q9H0G5 558 aaKnown RBP16.26■□□□□ 0.19
LINC01238-205ENST00000567549 A4GALTQ9NPC4 353 aa16.26■□□□□ 0.19
LINC01238-205ENST00000567549 PRORSD1PA6NEY8 169 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 RNF212BA8MTL3 300 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 TMEM229AB2RXF0 380 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 CLIC1O00299 241 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 AIM2O14862 343 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 FAM107AO95990 144 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 HNF1AP20823 631 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 SERPINF1P36955 418 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 MVDP53602 400 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 FOXG1P55316 489 aaPredicted RBP16.25■□□□□ 0.19
LINC01238-205ENST00000567549 LSM11P83369 360 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC01238-205ENST00000567549 FAM69AQ5T7M9 428 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 CPLX4Q7Z7G2 160 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 GPR137CQ8N3F9 429 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 ZIC4Q8N9L1 334 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 PIK3C3Q8NEB9 887 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 IL17RDQ8NFM7 739 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 BCAS4Q8TDM0 211 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 SLC25A36Q96CQ1 311 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 CCT8L2Q96SF2 557 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 EPYCQ99645 322 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 SHARPINQ9H0F6 387 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 SLC13A4Q9UKG4 626 aa16.25■□□□□ 0.19
LINC01238-205ENST00000567549 ALPK2Q86TB3 2170 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 NPIPB7O75200 414 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 TGDSO95455 350 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 PRKAR1BP31321 381 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 BNIP2Q12982 314 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 HIKESHIQ53FT3 197 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 SERPINA11Q86U17 422 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 LRRC8CQ8TDW0 803 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 OXGR1Q96P68 337 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 ALKBH3Q96Q83 286 aaPredicted RBP16.24■□□□□ 0.19
LINC01238-205ENST00000567549 RAB1BQ9H0U4 201 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 B3GAT2Q9NPZ5 323 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 CA10Q9NS85 328 aa16.24■□□□□ 0.19
LINC01238-205ENST00000567549 LOC390937A0A1W2PQ73 354 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 RPL36A-HNRNPH2H7BZ11 118 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 NDUFAB1O14561 156 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 LGI1O95970 557 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 BMP2P12643 396 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 ARR3P36575 388 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 RPS5P46782 204 aaKnown RBP16.23■□□□□ 0.19
LINC01238-205ENST00000567549 SELENOPP49908 381 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 SEC24CP53992 1094 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 SLC25A3Q00325 362 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 IL1RL1Q01638 556 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 ROR2Q01974 943 aaKnown RBP16.23■□□□□ 0.19
LINC01238-205ENST00000567549 SWI5Q1ZZU3 235 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 SLC9B1Q4ZJI4 515 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 RPS26P11Q5JNZ5 115 aaPredicted RBP16.23■□□□□ 0.19
LINC01238-205ENST00000567549 FAM166AQ6J272 317 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 C6orf89Q6UWU4 347 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 CLIP4Q8N3C7 705 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 LSMEM1Q8N8F7 131 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 ANKRD27Q96NW4 1050 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 ZNF607Q96SK3 696 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 VRK1Q99986 396 aaPredicted RBP16.23■□□□□ 0.19
LINC01238-205ENST00000567549 CRNNQ9UBG3 495 aaPredicted RBP16.23■□□□□ 0.19
LINC01238-205ENST00000567549 KCNS2Q9ULS6 477 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 PCDHB14Q9Y5E9 798 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 CORINQ9Y5Q5 1042 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 ATRQ13535 2644 aa16.23■□□□□ 0.19
LINC01238-205ENST00000567549 IGHV1-18A0A0C4DH31 117 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 EVPLLA8MZ36 301 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 ENTPD5O75356 428 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 SERPINB7O75635 380 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 C1QCP02747 245 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 MRPL19P49406 292 aaKnown RBP16.22■□□□□ 0.19
LINC01238-205ENST00000567549 PPOXP50336 477 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 CLDN17P56750 224 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 MAPK11Q15759 364 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 EFNB3Q15768 340 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 FAM91A1Q658Y4 838 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 REEP3Q6NUK4 255 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 ULK3Q6PHR2 472 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 UGT2A3Q6UWM9 527 aa16.22■□□□□ 0.19
LINC01238-205ENST00000567549 ADPRHL1Q8NDY3 354 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms