RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 ZNF503-AS2A6NEH8 195 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 PHF1O43189 567 aaPredicted RBP13.28□□□□□ -0.28
CDR2-206ENST00000567406 SEC14L2O76054 403 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 BMP4P12644 408 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 SERPINF1P36955 418 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 PDLIM4P50479 330 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 LSM11P83369 360 aaKnown RBP eCLIP13.28□□□□□ -0.284e-6■□□□□ 10.9
CDR2-206ENST00000567406 ARF1P84077 181 aaKnown RBP13.28□□□□□ -0.28
CDR2-206ENST00000567406 IL1RL1Q01638 556 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 NAAAQ02083 359 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 ADIPOQQ15848 244 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 GLIPR1L2Q4G1C9 344 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 SLC46A3Q7Z3Q1 461 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 ZCCHC24Q8N2G6 241 aaKnown RBP13.28□□□□□ -0.28
CDR2-206ENST00000567406 MIER2Q8N344 545 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 MFSD8Q8NHS3 518 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 NFKBIDQ8NI38 313 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 PROX1Q92786 737 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 TAAR8Q969N4 342 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 BEX2Q9BXY8 128 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 CHODLQ9H9P2 273 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 CACYBPQ9HB71 228 aaKnown RBP13.28□□□□□ -0.28
CDR2-206ENST00000567406 CA10Q9NS85 328 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 NKIRAS1Q9NYS0 192 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 SLC25A37Q9NYZ2 338 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 IFT52Q9Y366 437 aa13.28□□□□□ -0.28
CDR2-206ENST00000567406 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.28□□□□□ -0.284e-8■■■□□ 15.2
CDR2-206ENST00000567406 IGHV4-61A0A0C4DH41 118 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 TMEM247A6NEH6 219 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 VWC2LB2RUY7 222 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 M0R082 166 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 TPST1O60507 370 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 ERLIN1O75477 346 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 VAMP5O95183 116 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 CRYAAP02489 173 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 OR4A8P0C604 315 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 FAM157CP0CG43 387 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 ZNF43P17038 809 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 HOXB9P17482 250 aaPredicted RBP13.27□□□□□ -0.29
CDR2-206ENST00000567406 HTR2AP28223 471 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 SNRPD2P62316 118 aaKnown RBP13.27□□□□□ -0.29
CDR2-206ENST00000567406 HGFACQ04756 655 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 PHYHD1Q5SRE7 291 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 CARD17Q5XLA6 110 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 MSANTD1Q6ZTZ1 278 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 MSRB3Q8IXL7 192 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 ZNF417Q8TAU3 575 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 RNF217Q8TC41 542 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 BOD1Q96IK1 185 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 ZNF587Q96SQ5 575 aaPredicted RBP13.27□□□□□ -0.29
CDR2-206ENST00000567406 WFDC6Q9BQY6 131 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 KATNB1Q9BVA0 655 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 PIF1Q9H611 641 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 ARMC7Q9H6L4 198 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 A4GALTQ9NPC4 353 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 B3GAT1Q9P2W7 334 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 RPS6KB2Q9UBS0 482 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 CDC42EP3Q9UKI2 254 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 USH1CQ9Y6N9 552 aa13.27□□□□□ -0.29
CDR2-206ENST00000567406 IGKV1D-42A0A075B6H8 117 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 ARPC4-TTLL3A0A0A6YYG9 625 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 A0A1B0GWA3 101 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 LMX1BO60663 402 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 ZNF432O94892 652 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 HLA-DOBP13765 273 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 IGFBP5P24593 272 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 GTF2E2P29084 291 aaKnown RBP13.26□□□□□ -0.29
CDR2-206ENST00000567406 GRPRP30550 384 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 NR4A2P43354 598 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 NPRL3Q12980 569 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 C1DQ13901 141 aaKnown RBP13.26□□□□□ -0.29
CDR2-206ENST00000567406 CEACAM16Q2WEN9 425 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 IQCCQ4KMZ1 466 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 EPGNQ6UW88 154 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 CROCCP2Q86T23 111 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 FUNDC1Q8IVP5 155 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 WDFY1Q8IWB7 410 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 BBS10Q8TAM1 723 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 TLCD1Q96CP7 247 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 MSI2Q96DH6 328 aaKnown RBP13.26□□□□□ -0.29
CDR2-206ENST00000567406 SOX7Q9BT81 388 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 LINC00470Q9BZP3 86 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 SHARPINQ9H0F6 387 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 TMBIM4Q9HC24 238 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 GPR35Q9HC97 309 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 BCL2L10Q9HD36 194 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 OBP2BQ9NPH6 170 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 CRNNQ9UBG3 495 aaPredicted RBP13.26□□□□□ -0.29
CDR2-206ENST00000567406 FKBP7Q9Y680 259 aa13.26□□□□□ -0.29
CDR2-206ENST00000567406 A0A096LPI6 279 aa13.25□□□□□ -0.29
CDR2-206ENST00000567406 LOC100289279A0A1B0GTE1 492 aa13.25□□□□□ -0.29
CDR2-206ENST00000567406 SH3PXD2BA1X283 911 aa13.25□□□□□ -0.29
CDR2-206ENST00000567406 C5orf58C9J3I9 102 aa13.25□□□□□ -0.29
CDR2-206ENST00000567406 SLC43A1O75387 559 aa13.25□□□□□ -0.29
CDR2-206ENST00000567406 IGLV1-44P01699 117 aa13.25□□□□□ -0.29
CDR2-206ENST00000567406 CSF3P09919 207 aa13.25□□□□□ -0.29
CDR2-206ENST00000567406 THBS4P35443 961 aa13.25□□□□□ -0.29
CDR2-206ENST00000567406 IDH3GP51553 393 aaPredicted RBP13.25□□□□□ -0.29
CDR2-206ENST00000567406 ZSWIM7Q19AV6 140 aa13.25□□□□□ -0.29
CDR2-206ENST00000567406 PAGE3Q5JUK9 113 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms