RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 TRDCB7Z8K6 153 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 C12orf77C9JDV5 145 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 G3V4G9 280 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 RS1O15537 224 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 CSF3P09919 207 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 CCDC192P0DO97 292 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 PTGFRP43088 359 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 PSMD8P48556 350 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 CYB561P49447 251 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 PKNOX1P55347 436 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 EWSR1Q01844 656 aaKnown RBP eCLIP1.17□□□□□ -2.22
CDH1-211ENST00000567320 CDC20Q12834 499 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 ERCC8Q13216 396 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 MICBQ29980 383 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 C2orf76Q3KRA6 126 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 TTLL9Q3SXZ7 439 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 HES5Q5TA89 166 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 TMED8Q6PL24 325 aaPredicted RBP1.17□□□□□ -2.22
CDH1-211ENST00000567320 CES3Q6UWW8 571 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 LINC00336Q6ZUF6 198 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 H2AFVQ71UI9 128 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 DPY19L4Q7Z388 723 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 LHFPL4Q7Z7J7 247 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 MIR7-3HGQ8N6C7 128 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 LRRC52Q8N7C0 313 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 MINDY2Q8NBR6 621 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 OR1P1Q8NH06 330 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 AURKBQ96GD4 344 aaPredicted RBP1.17□□□□□ -2.22
CDH1-211ENST00000567320 ITCHQ96J02 903 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 ZNF382Q96SR6 550 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 TEKT3Q9BXF9 490 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 ACTR8Q9H981 624 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 HMG20AQ9NP66 347 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 SEC14L3Q9UDX4 400 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 COPS3Q9UNS2 423 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 CARMIL1Q5VZK9 1371 aa1.17□□□□□ -2.22
CDH1-211ENST00000567320 TMEM223A0PJW6 202 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 VGLL3A8MV65 326 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 J3QKU1 62 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 XPO1O14980 1071 aaKnown RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 CHST1O43916 411 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 CXCL13O43927 109 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 SSX5O60225 188 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 LRATO95237 230 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 OPN1MWP04001 364 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 OR56A5P0C7T3 313 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 GKN3PP0CG01 181 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 OPN1MW2P0DN77 364 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 OPN1MW3P0DN78 364 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 STARD6P59095 220 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 FLI1Q01543 452 aaPredicted RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 PRKCDQ05655 676 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 ACTN3Q08043 901 aaPredicted RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 SPP2Q13103 211 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 IL15RAQ13261 267 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 LASP1Q14847 261 aaKnown RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 LINC01620Q4KN68 170 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 AFTPHQ6ULP2 937 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 HSDL2Q6YN16 418 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 Q6ZS52 159 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 NCCRP1Q6ZVX7 275 aaPredicted RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 GET4Q7L5D6 327 aaPredicted RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 ERASQ7Z444 233 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 DHRSXQ8N5I4 330 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 FAM71CQ8NEG0 241 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 OR56B1Q8NGI3 324 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 OR10G4Q8NGN3 311 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 RTN4IP1Q8WWV3 396 aaPredicted RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 C12orf66Q96MD2 445 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 CCDC43Q96MW1 224 aaKnown RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 KLF6Q99612 283 aaPredicted RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 RNF5Q99942 180 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 MRPL45Q9BRJ2 306 aaKnown RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 RIOK2Q9BVS4 552 aaKnown RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 C12orf10Q9HB07 376 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 TBK1Q9UHD2 729 aa1.16□□□□□ -2.22
CDH1-211ENST00000567320 F11RQ9Y624 299 aaKnown RBP1.16□□□□□ -2.22
CDH1-211ENST00000567320 GPATCH8Q9UKJ3 1502 aaKnown RBP1.15□□□□□ -2.22
CDH1-211ENST00000567320 LTBP4Q8N2S1 1624 aa1.15□□□□□ -2.22
CDH1-211ENST00000567320 PHF3Q92576 2039 aaKnown RBP1.15□□□□□ -2.22
CDH1-211ENST00000567320 IGHV5-10-1A0A0J9YXX1 117 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 J3QRE1 110 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 FOXE1O00358 373 aaPredicted RBP1.15□□□□□ -2.23
CDH1-211ENST00000567320 DEDDO75618 318 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 IGHV1-8P0DP01 117 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 PGCP20142 388 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 FGF8P55075 233 aaPredicted RBP1.15□□□□□ -2.23
CDH1-211ENST00000567320 FZD2Q14332 565 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 FAM78AQ5JUQ0 283 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 SASS6Q6UVJ0 657 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 KIAA1328Q86T90 577 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 TMEM104Q8NE00 496 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 DENND6BQ8NEG7 585 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 ACOT11Q8WXI4 607 aaPredicted RBP1.15□□□□□ -2.23
CDH1-211ENST00000567320 NEURL3Q96EH8 262 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 RANBP3Q9H6Z4 567 aaPredicted RBP1.15□□□□□ -2.23
CDH1-211ENST00000567320 HOXC10Q9NYD6 342 aa1.15□□□□□ -2.23
CDH1-211ENST00000567320 RPL36Q9Y3U8 105 aaKnown RBP1.15□□□□□ -2.23
CDH1-211ENST00000567320 TET2Q6N021 2002 aaPredicted RBP1.15□□□□□ -2.23
CDH1-211ENST00000567320 SLC9B1P1A6NJY1 282 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms