RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ZNF540Q8NDQ6 660 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 BBS10Q8TAM1 723 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 GTF2H4Q92759 462 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 OXGR1Q96P68 337 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 HEATR1Q9H583 2144 aaKnown RBP13.05□□□□□ -0.32
RNF40-209ENST00000566703 A4GALTQ9NPC4 353 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 NKIRAS1Q9NYS0 192 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 SONP18583 2426 aaKnown RBP13.05□□□□□ -0.32
RNF40-209ENST00000566703 PLCE1Q9P212 2302 aa13.05□□□□□ -0.32
RNF40-209ENST00000566703 CLIC1O00299 241 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 ZNF432O94892 652 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 IGKV3-15P01624 115 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 PNMTP11086 282 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 ETS2P15036 469 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 CBR1P16152 277 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 GTF2E2P29084 291 aaKnown RBP13.04□□□□□ -0.32
RNF40-209ENST00000566703 NR4A2P43354 598 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 MRPL19P49406 292 aaKnown RBP13.04□□□□□ -0.32
RNF40-209ENST00000566703 ROR2Q01974 943 aaKnown RBP13.04□□□□□ -0.32
RNF40-209ENST00000566703 EGR4Q05215 589 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 ADIPOQQ15848 244 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 GTDC1Q4AE62 458 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 RPS26P11Q5JNZ5 115 aaPredicted RBP13.04□□□□□ -0.32
RNF40-209ENST00000566703 C6orf10Q5SRN2 563 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 NUP37Q8NFH4 326 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 IL17RDQ8NFM7 739 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 SLC25A36Q96CQ1 311 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 SORCS2Q96PQ0 1159 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 PIMREGQ9BSJ6 248 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 PTDSS2Q9BVG9 487 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 PAIP1Q9H074 479 aaKnown RBP13.04□□□□□ -0.32
RNF40-209ENST00000566703 SHARPINQ9H0F6 387 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 PLK3Q9H4B4 646 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 PCDHB14Q9Y5E9 798 aa13.04□□□□□ -0.32
RNF40-209ENST00000566703 AIM2O14862 343 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 PHF1O43189 567 aaPredicted RBP13.03□□□□□ -0.32
RNF40-209ENST00000566703 SLC43A1O75387 559 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 OR4A8P0C604 315 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 CECR9P0C854 216 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 PRKAR1BP31321 381 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 RPS5P46782 204 aaKnown RBP13.03□□□□□ -0.32
RNF40-209ENST00000566703 PPOXP50336 477 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 CLDN17P56750 224 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 LGALS3BPQ08380 585 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 FAM69AQ5T7M9 428 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 LINGO2Q7L985 606 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 SLC46A3Q7Z3Q1 461 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 OR6S1Q8NH40 331 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 MGARPQ8TDB4 240 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 DNAJA4Q8WW22 397 aaPredicted RBP13.03□□□□□ -0.32
RNF40-209ENST00000566703 SLC38A4Q969I6 547 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 VPS33AQ96AX1 596 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 FOXN4Q96NZ1 517 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 ALKBH3Q96Q83 286 aaPredicted RBP13.03□□□□□ -0.32
RNF40-209ENST00000566703 OR52B2Q96RD2 323 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 VRK1Q99986 396 aaPredicted RBP13.03□□□□□ -0.32
RNF40-209ENST00000566703 RAB1BQ9H0U4 201 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 NELFAQ9H3P2 528 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 ZNF442Q9H7R0 627 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 RPS6KB2Q9UBS0 482 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 KCNS2Q9ULS6 477 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 GMEB1Q9Y692 573 aa13.03□□□□□ -0.32
RNF40-209ENST00000566703 A0A096LPE4 126 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 A0A1W2PPZ6 126 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 C5orf58C9J3I9 102 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 NR5A2O00482 541 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 AKAP8O43823 692 aaKnown RBP13.02□□□□□ -0.33
RNF40-209ENST00000566703 LY6HO94772 140 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 PPIBP23284 216 aaKnown RBP13.02□□□□□ -0.33
RNF40-209ENST00000566703 ARR3P36575 388 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 IDH3GP51553 393 aaPredicted RBP13.02□□□□□ -0.33
RNF40-209ENST00000566703 ARF1P84077 181 aaKnown RBP13.02□□□□□ -0.33
RNF40-209ENST00000566703 C1DQ13901 141 aaKnown RBP13.02□□□□□ -0.33
RNF40-209ENST00000566703 GGTLC2Q14390 218 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 MFSD13AQ14CX5 517 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 FAM166AQ6J272 317 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 H1FNTQ75WM6 255 aaPredicted RBP13.02□□□□□ -0.33
RNF40-209ENST00000566703 MAVSQ7Z434 540 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 KDM8Q8N371 416 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 GPR137CQ8N3F9 429 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 GOLGA6L1Q8N7Z2 621 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 PIK3C3Q8NEB9 887 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 OR9I1Q8NGQ6 314 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 NEU4Q8WWR8 484 aaPredicted RBP13.02□□□□□ -0.33
RNF40-209ENST00000566703 KTI12Q96EK9 354 aaPredicted RBP13.02□□□□□ -0.33
RNF40-209ENST00000566703 ANKRD27Q96NW4 1050 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 DOK1Q99704 481 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 SPATA5L1Q9BVQ7 753 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 EVA1AQ9H8M9 152 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 B3GAT1Q9P2W7 334 aa13.02□□□□□ -0.33
RNF40-209ENST00000566703 YLPM1P49750 1951 aaKnown RBP13.01□□□□□ -0.33
RNF40-209ENST00000566703 ZNF500O60304 480 aaPredicted RBP13.01□□□□□ -0.33
RNF40-209ENST00000566703 TGDSO95455 350 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 ERCC1P07992 297 aaPredicted RBP13.01□□□□□ -0.33
RNF40-209ENST00000566703 NUDT7P0C024 238 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 APEHP13798 732 aaKnown RBP13.01□□□□□ -0.33
RNF40-209ENST00000566703 HOXB9P17482 250 aaPredicted RBP13.01□□□□□ -0.33
RNF40-209ENST00000566703 NPR2P20594 1047 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 MAGOHP61326 146 aaKnown RBP13.01□□□□□ -0.33
RNF40-209ENST00000566703 HGFACQ04756 655 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms