RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 FAM91A1Q658Y4 838 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 NIPAL3Q6P499 406 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 ULK3Q6PHR2 472 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 NET1Q7Z628 596 aaPredicted RBP12.82□□□□□ -0.36
FANCA-220ENST00000566409 TSPYL5Q86VY4 417 aaPredicted RBP12.82□□□□□ -0.36
FANCA-220ENST00000566409 C17orf78Q8N4C9 275 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 C11orf65Q8NCR3 313 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 GPR32P1Q8NGA4 272 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 ZNF417Q8TAU3 575 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 RADILQ96JH8 1075 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 ZNF587Q96SQ5 575 aaPredicted RBP12.82□□□□□ -0.36
FANCA-220ENST00000566409 GRIP2Q9C0E4 1043 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 KLHL14Q9P2G3 628 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 TESQ9UGI8 421 aaKnown RBP12.82□□□□□ -0.36
FANCA-220ENST00000566409 GDF2Q9UK05 429 aaPredicted RBP12.82□□□□□ -0.36
FANCA-220ENST00000566409 MS4A18H0YCH9 400 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 M0R3H8 397 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 LGI1O95970 557 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 HPRP00739 348 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 IGHV4-39P01824 125 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 CBLP22681 906 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 CRYBA2P53672 197 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 CDH12P55289 794 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 CLDN17P56750 224 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 TGFBR3Q03167 851 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 RBBP4Q09028 425 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 SF3A3Q12874 501 aaKnown RBP eCLIP12.81□□□□□ -0.362e-19■■□□□ 11.9
FANCA-220ENST00000566409 TNK1Q13470 666 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 NFYCQ13952 458 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 CYP51A1Q16850 503 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 MS4A18Q3C1V0 323 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 KRTAP21-3Q3LHN1 58 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 FAM69AQ5T7M9 428 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 SLC22A25Q6T423 547 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 KLHL17Q6TDP4 642 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 NHLRC1Q6VVB1 395 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 DNM1P46Q6ZS02 220 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 BHLHE22Q8NFJ8 381 aaPredicted RBP12.81□□□□□ -0.36
FANCA-220ENST00000566409 OR4D11Q8NGI4 311 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 OR1K1Q8NGR3 316 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 BCL2L2Q92843 193 aaPredicted RBP12.81□□□□□ -0.36
FANCA-220ENST00000566409 GTPBP3Q969Y2 492 aaKnown RBP12.81□□□□□ -0.36
FANCA-220ENST00000566409 SLC47A1Q96FL8 570 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 OXGR1Q96P68 337 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 ALKBH3Q96Q83 286 aaPredicted RBP12.81□□□□□ -0.36
FANCA-220ENST00000566409 ARHGDIGQ99819 225 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 NELFAQ9H3P2 528 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 MGAT4BQ9UQ53 548 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 ANGPT4Q9Y264 503 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 B3GALT5Q9Y2C3 310 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 AMDHD2Q9Y303 409 aa12.81□□□□□ -0.36
FANCA-220ENST00000566409 TRAV36DV7A0A075B6V5 113 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 LOC102725191A0A1B0GVB3 256 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 LRRN3E7EW58 273 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 FXYD1O00168 92 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 OR2T1O43869 369 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 LYPD3O95274 346 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 BGLAPP02818 100 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 THY1P04216 161 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 HLA-DOBP13765 273 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 CD247P20963 164 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 TTKP33981 857 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 ACVR1BP36896 505 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 PRPS1P60891 318 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 NRF1Q16656 503 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 CLEC12BQ2HXU8 276 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 C11orf71Q6IPW1 123 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 NANOGP8Q6NSW7 305 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 C5orf46Q6UWT4 87 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 LINC00114Q6XXX2 140 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 H1FNTQ75WM6 255 aaPredicted RBP12.8□□□□□ -0.36
FANCA-220ENST00000566409 RBM45Q8IUH3 476 aaKnown RBP12.8□□□□□ -0.36
FANCA-220ENST00000566409 WDFY1Q8IWB7 410 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 OR6T1Q8NGN1 323 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 OR10A6Q8NH74 314 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 TAMM41Q96BW9 452 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 ZNF837Q96EG3 531 aaPredicted RBP12.8□□□□□ -0.36
FANCA-220ENST00000566409 SLC41A3Q96GZ6 507 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 MOGAT1Q96PD6 335 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 DHRS9Q9BPW9 319 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 LINC00470Q9BZP3 86 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 NANOGQ9H9S0 305 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 TMEM27Q9HBJ8 222 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 FGFR1OP2Q9NVK5 253 aa12.8□□□□□ -0.36
FANCA-220ENST00000566409 ZNF587BE7ETH6 402 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 AIM2O14862 343 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 TRAF3IP2O43734 574 aaPredicted RBP12.79□□□□□ -0.36
FANCA-220ENST00000566409 KRT33AO76009 404 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 ZNF43P17038 809 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 PCGF2P35227 344 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 KRTAP1-1Q07627 177 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 TBRG1Q3YBR2 411 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 RABL3Q5HYI8 236 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 PHYHD1Q5SRE7 291 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 WDR88Q6ZMY6 472 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 TMEM123Q8N131 208 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 TRMT61AQ96FX7 289 aaKnown RBP12.79□□□□□ -0.36
FANCA-220ENST00000566409 MCHR1Q99705 422 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 SAR1AQ9NR31 198 aa12.79□□□□□ -0.36
FANCA-220ENST00000566409 FAIMQ9NVQ4 179 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms