RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ZNF546Q86UE3 836 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 PARP16Q8N5Y8 322 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 ZFP28Q8NHY6 868 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 NUDCD2Q8WVJ2 157 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 FAR1Q8WVX9 515 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 XAGE5Q8WWM1 108 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 RMND5BQ96G75 393 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-205ENST00000566136 AKR1E2Q96JD6 320 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 SLC6A17Q9H1V8 727 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 SPHK1Q9NYA1 384 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 CISD1Q9NZ45 108 aaKnown RBP9.63□□□□□ -0.87
UBFD1-205ENST00000566136 CIDEBQ9UHD4 219 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 HS3ST2Q9Y278 367 aa9.63□□□□□ -0.87
UBFD1-205ENST00000566136 MTCL1Q9Y4B5 1905 aaKnown RBP9.63□□□□□ -0.87
UBFD1-205ENST00000566136 MS4A18H0YCH9 400 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 H3BNH8 94 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 M0QXV9 152 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 MOSPD3O75425 235 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 PDYNP01213 254 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 CEACAM5P06731 702 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 FGF5P12034 268 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 SRD5A1P18405 259 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 CCNOP22674 350 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 GNPDA1P46926 289 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 SPINT3P49223 89 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 CCR8P51685 355 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 IST1P53990 364 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 EIF2S3LQ2VIR3 472 aaKnown RBP9.62□□□□□ -0.87
UBFD1-205ENST00000566136 ZNF691Q5VV52 312 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 TBPL2Q6SJ96 375 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 TMPRSS11FQ6ZWK6 438 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 SLC22A15Q8IZD6 547 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 RNF175Q8N4F7 328 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 LRRC75AQ8NAA5 344 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 OR10A6Q8NH74 314 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 MAGEE2Q8TD90 523 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-205ENST00000566136 MYRFQ9Y2G1 1151 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 DOCK8Q8NF50 2099 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 A0A1B0GUS0 222 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 H3BSA7 217 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 NARSO43776 548 aaKnown RBP9.62□□□□□ -0.87
UBFD1-205ENST00000566136 CLDN9O95484 217 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 CRYGBP07316 175 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 ZNF23P17027 643 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 CDKN2CP42773 168 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 NTHL1P78549 312 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 DLK1P80370 383 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 PAX5Q02548 391 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 SLAMF1Q13291 335 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 KLHL22Q53GT1 634 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 OTUD3Q5T2D3 398 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-205ENST00000566136 ANKRD46Q86W74 232 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 GTF2H4Q92759 462 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 ERGIC1Q969X5 290 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 AURKBQ96GD4 344 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-205ENST00000566136 MCCC1Q96RQ3 725 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-205ENST00000566136 RBM38Q9H0Z9 239 aaKnown RBP9.62□□□□□ -0.87
UBFD1-205ENST00000566136 CLK4Q9HAZ1 481 aaKnown RBP9.62□□□□□ -0.87
UBFD1-205ENST00000566136 RDH14Q9HBH5 336 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 USP34Q70CQ2 3546 aa9.62□□□□□ -0.87
UBFD1-205ENST00000566136 NUP214P35658 2090 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-205ENST00000566136 TMEM8BA6NDV4 472 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 CXorf65A6NEN9 183 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 TUBAL3A6NHL2 446 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 SDC3O75056 442 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 LDB3O75112 727 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 RAD51DO75771 328 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 LRATO95237 230 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 SNAP29O95721 258 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 OR56A5P0C7T3 313 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 BCKDHAP12694 445 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 HTR2AP28223 471 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 NAAAQ02083 359 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 MEP1AQ16819 746 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 NKAIN2Q5VXU1 208 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 TMEM215Q68D42 235 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 GDPD4Q6W3E5 623 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 RTL4Q6ZR62 310 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 HSD11B1LQ7Z5J1 315 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 MSRB3Q8IXL7 192 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 CCDC36Q8IYA8 594 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 PACRGLQ8N7B6 248 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 ZNF611Q8N823 705 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 TMEM105Q8N8V8 129 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 OR5T3Q8NGG3 340 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 ITFG1Q8TB96 612 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 PLEKHA8Q96JA3 519 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 GFI1Q99684 422 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 P2RY13Q9BPV8 354 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 C1orf109Q9NX04 203 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 SLC25A37Q9NYZ2 338 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 ZFHX2Q9C0A1 2572 aaPredicted RBP9.61□□□□□ -0.87
UBFD1-205ENST00000566136 HELZP42694 1942 aaKnown RBP9.61□□□□□ -0.87
UBFD1-205ENST00000566136 RS1O15537 224 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 PRF1P14222 555 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 HOXA9P31269 272 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 RGS8P57771 180 aaPredicted RBP9.61□□□□□ -0.87
UBFD1-205ENST00000566136 LY6G5CQ5SRR4 150 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 TUBA3EQ6PEY2 450 aa9.61□□□□□ -0.87
UBFD1-205ENST00000566136 TTC33Q6PID6 262 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms