RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FRKP42685 505 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 OR1D4P47884 311 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CST6Q15828 149 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 AGBL4Q5VU57 503 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 FRG2Q64ET8 278 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ZNF793Q6ZN11 406 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 C10orf53Q8N6V4 93 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 UBASH3BQ8TF42 649 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 INTS12Q96CB8 462 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 SORCS2Q96PQ0 1159 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 FRG2BQ96QU4 278 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 OR5B2Q96R09 309 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 LPAR4Q99677 370 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 PECRQ9BY49 303 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 TCF7L1Q9HCS4 588 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ISYNA1Q9NPH2 558 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 TAS2R10Q9NYW0 307 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 PPP4R1LQ9P1A2 415 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ARID1AO14497 2285 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 H0YIG0 161 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SYT5O00445 386 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 OR10H3O60404 316 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 FMO6PO60774 539 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 RPS17P08708 135 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 SMIM18P0DKX4 95 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CDH12P55289 794 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 RAG2P55895 527 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 PSMA6P60900 246 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 RPS14P62263 151 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 BTG2P78543 158 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 RIN1Q13671 783 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 PIP5KL1Q5T9C9 394 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 REEP3Q6NUK4 255 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 COMMD6Q7Z4G1 85 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SLC22A18ASQ8N1D0 253 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 C12orf45Q8N5I9 185 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 KCNG3Q8TAE7 436 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 GTF2H4Q92759 462 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SLC6A18Q96N87 628 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 OR10A4Q9H209 315 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SCPEP1Q9HB40 452 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 ING1Q9UK53 422 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 TMEM184BQ9Y519 407 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 GMPPBQ9Y5P6 360 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 RNASET2O00584 256 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 GCM2O75603 506 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 CISD3P0C7P0 127 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 PRKCAP17252 672 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SSTR2P30874 369 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 GPR4P46093 362 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ACVR1Q04771 509 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 PRKCDQ05655 676 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SLC35D3Q5M8T2 416 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 IZUMO1Q8IYV9 350 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ABCA7Q8IZY2 2146 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 HERVK_113Q902F9 699 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CPNE4Q96A23 557 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 ZNF524Q96C55 264 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 RBM14Q96PK6 669 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 SSX3Q99909 188 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ALG8Q9BVK2 526 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 AMBRA1Q9C0C7 1298 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 USP36Q9P275 1121 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 ERVK-18Q9QC07 812 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 GRHPRQ9UBQ7 328 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 ERI3O43414 337 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 NDUFB5O43674 189 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ZNF26P17031 533 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 MSR1P21757 451 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CD79BP40259 229 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 GFERP55789 205 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CATR1Q13166 79 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 METTL11BQ5VVY1 283 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CGREF1Q99674 301 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 NPAS1Q99742 590 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 RANGRFQ9HD47 186 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 SLC5A10A0PJK1 596 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 PRAMEF27A3QJZ7 478 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CLIC1O00299 241 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SOX3P41225 446 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 DAPP51397 102 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CDK3Q00526 305 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 HNF4GQ14541 408 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 KIAA0040Q15053 153 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 YIF1BQ5BJH7 314 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 MLIPQ5VWP3 458 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ERI1Q8IV48 349 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 TCTEX1D1Q8N7M0 179 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 TSTD1Q8NFU3 115 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ASB12Q8WXK4 309 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 GCDHQ92947 438 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 DPCDQ9BVM2 203 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 CYSLTR2Q9NS75 346 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 HAO2Q9NYQ3 351 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 THYN1Q9P016 225 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 MUTYHQ9UIF7 546 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 NDRG4Q9ULP0 352 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms