RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 MPGP29372 298 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 CDH12P55289 794 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 NCALDP61601 193 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 NRF1Q16656 503 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 HIKESHIQ53FT3 197 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 OR7E24Q6IFN5 339 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 NIPAL3Q6P499 406 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 TSPYL5Q86VY4 417 aaPredicted RBP11.12□□□□□ -0.63
HERC2-206ENST00000564519 SNX32Q86XE0 403 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 PRIMA1Q86XR5 153 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 BHLHE22Q8NFJ8 381 aaPredicted RBP11.12□□□□□ -0.63
HERC2-206ENST00000564519 OR6T1Q8NGN1 323 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 SMAP2Q8WU79 429 aaPredicted RBP11.12□□□□□ -0.63
HERC2-206ENST00000564519 FBXW5Q969U6 566 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 LRRC58Q96CX6 371 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 SLC47A1Q96FL8 570 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 ALKBH3Q96Q83 286 aaPredicted RBP11.12□□□□□ -0.63
HERC2-206ENST00000564519 MCHR1Q99705 422 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 CCDC134Q9H6E4 229 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 SLC17A5Q9NRA2 495 aa11.12□□□□□ -0.63
HERC2-206ENST00000564519 ZNF701Q9NV72 531 aaPredicted RBP11.12□□□□□ -0.63
HERC2-206ENST00000564519 MAGED1Q9Y5V3 778 aaPredicted RBP11.12□□□□□ -0.63
HERC2-206ENST00000564519 FLNAP21333 2647 aaKnown RBP11.12□□□□□ -0.63
HERC2-206ENST00000564519 KIAA1324LA8MWY0 1029 aaPredicted RBP11.11□□□□□ -0.63
HERC2-206ENST00000564519 INAFM1C9JVW0 142 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 M0R1B8 84 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 MRASO14807 208 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 AIM2O14862 343 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 ZNF432O94892 652 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 LYPD3O95274 346 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 HPRP00739 348 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 BGLAPP02818 100 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 CD40P25942 277 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 GTF2E2P29084 291 aaKnown RBP11.11□□□□□ -0.63
HERC2-206ENST00000564519 CDKN1AP38936 164 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 CDH11P55287 796 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 CLDN17P56750 224 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 CYLC2Q14093 348 aaPredicted RBP11.11□□□□□ -0.63
HERC2-206ENST00000564519 VMACQ2NL98 169 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 FAM69AQ5T7M9 428 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 B3GLCTQ6Y288 498 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 WDR88Q6ZMY6 472 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 RANBP3LQ86VV4 465 aaPredicted RBP11.11□□□□□ -0.63
HERC2-206ENST00000564519 CALHM3Q86XJ0 350 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 WDFY1Q8IWB7 410 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 PIAS4Q8N2W9 510 aaPredicted RBP11.11□□□□□ -0.63
HERC2-206ENST00000564519 POMGNT2Q8NAT1 580 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
HERC2-206ENST00000564519 VANGL1Q8TAA9 524 aaPredicted RBP11.11□□□□□ -0.63
HERC2-206ENST00000564519 C10orf82Q8WW14 230 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 MDFIQ99750 246 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 CXorf56Q9H5V9 222 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 CISD1Q9NZ45 108 aaKnown RBP11.11□□□□□ -0.63
HERC2-206ENST00000564519 ARMCX1Q9P291 453 aa11.11□□□□□ -0.63
HERC2-206ENST00000564519 CPSF4LA6NMK7 179 aaKnown RBP11.1□□□□□ -0.63
HERC2-206ENST00000564519 E7EQL1 145 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 MS4A18H0YCH9 400 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 OVOL3O00110 214 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 OR2T1O43869 369 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 CD8AP01732 235 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 HLA-DOBP13765 273 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 ZNF43P17038 809 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 MDH1P40925 334 aaKnown RBP11.1□□□□□ -0.63
HERC2-206ENST00000564519 ATP5J2P56134 94 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 RPS4XP62701 263 aaKnown RBP11.1□□□□□ -0.63
HERC2-206ENST00000564519 MS4A18Q3C1V0 323 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 MMEL1Q495T6 779 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 HSP90B2PQ58FF3 399 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 COQ5Q5HYK3 327 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 ENTPD8Q5MY95 495 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 C5orf46Q6UWT4 87 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 LINC00114Q6XXX2 140 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 H1FNTQ75WM6 255 aaPredicted RBP11.1□□□□□ -0.63
HERC2-206ENST00000564519 SSX8Q7RTT4 187 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 PATL1Q86TB9 770 aaKnown RBP11.1□□□□□ -0.63
HERC2-206ENST00000564519 C17orf78Q8N4C9 275 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 OR8J3Q8NGG0 315 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 OR1K1Q8NGR3 316 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 SLC41A3Q96GZ6 507 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 OXGR1Q96P68 337 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 MOGAT1Q96PD6 335 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 ZNF317Q96PQ6 595 aaPredicted RBP11.1□□□□□ -0.63
HERC2-206ENST00000564519 SELENONQ9NZV5 590 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 B3GALT5Q9Y2C3 310 aa11.1□□□□□ -0.63
HERC2-206ENST00000564519 ROS1P08922 2347 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 A0A096LPE4 126 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 A0A1W2PPZ6 126 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 ZNF587BE7ETH6 402 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 TRAF3IP2O43734 574 aaPredicted RBP11.09□□□□□ -0.63
HERC2-206ENST00000564519 FMO6PO60774 539 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 KRT33AO76009 404 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 C8BP07358 591 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 TNFRSF1BP20333 461 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 PTAFRP25105 342 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 TUBA1BP68363 451 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 TUBA4AP68366 448 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 IL1RL1Q01638 556 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 TGFBR3Q03167 851 aa11.09□□□□□ -0.63
HERC2-206ENST00000564519 C1DQ13901 141 aaKnown RBP11.09□□□□□ -0.63
HERC2-206ENST00000564519 TBRG1Q3YBR2 411 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms