RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 PDCD5O14737 125 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ARPC1BO15143 372 aaKnown RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 OGG1O15527 345 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 FLRT2O43155 660 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SEPT4O43236 478 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 EMC8O43402 210 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CREBL2O60519 120 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GALR3O60755 368 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 KHDRBS3O75525 346 aaKnown RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GATBO75879 557 aaKnown RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 RGS11O94810 467 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 TOXO94900 526 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 OR2A4O95047 310 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SLC2A10O95528 541 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 HIST1H2ABP04908 130 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ATP1B1P05026 303 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CD1AP06126 327 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 LPLP06858 475 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ANKRD34CP0C6C1 535 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 PRG2P13727 222 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GABRA1P14867 456 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GJA1P17302 382 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ATF1P18846 271 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 NT5EP21589 574 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 DRD5P21918 477 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 NFYAP23511 347 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CST5P28325 142 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 PDHA2P29803 388 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 PRKAR1BP31321 381 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 PPM1AP35813 382 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 HSD17B2P37059 387 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GPR4P46093 362 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ID4P47928 161 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 VEGFCP49767 419 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GATMP50440 423 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 NCBP2P52298 156 aaKnown RBP eCLIP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 MAZP56270 477 aaKnown RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 RGS8P57771 180 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 OR10A3P58181 314 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 TAS2R38P59533 333 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 MRPS10P82664 201 aaKnown RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 REEP5Q00765 189 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SLC3A1Q07837 685 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 FUT5Q11128 374 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 HTR4Q13639 388 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 HLXQ14774 488 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF169Q14929 603 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 UBXN2BQ14CS0 331 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ETFDHQ16134 617 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF658BQ4V348 819 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ACSM3Q53FZ2 586 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 LRRC73Q5JTD7 316 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CLVS2Q5SYC1 327 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SHEQ5VZ18 495 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 DMKNQ6E0U4 476 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 Q6ZTK2 550 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 Q6ZVL8 140 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 TMUB2Q71RG4 321 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 DPPA4Q7L190 304 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 HIST3H2AQ7L7L0 130 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF627Q7L945 461 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 LINGO2Q7L985 606 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GDF7Q7Z4P5 450 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 C17orf64Q86WR6 236 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 MEX3DQ86XN8 651 aaKnown RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CDH26Q8IXH8 852 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 PDZD9Q8IXQ8 264 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CFAP206Q8IYR0 622 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CMTM4Q8IZR5 234 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 STPG2Q8N412 459 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 OR2C3Q8N628 320 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 TMEM99Q8N816 258 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ARL14EPQ8N8R7 260 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CLRN3Q8NCR9 226 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF740Q8NDX6 193 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 C1orf162Q8NEQ5 155 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 BBS1Q8NFJ9 593 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 OR10H4Q8NGA5 316 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 OR11G2Q8NGC1 345 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 OR52L1Q8NGH7 329 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 COQ8AQ8NI60 647 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF461Q8TAF7 563 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SLC2A12Q8TD20 617 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ADAMTS18Q8TE60 1221 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GANCQ8TET4 914 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 C15orf40Q8WUR7 153 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ASB13Q8WXK3 278 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 PHYHIPQ92561 330 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 RIT1Q92963 219 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 HIST1H2ACQ93077 130 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 RAD51AP1Q96B01 352 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SLC41A3Q96GZ6 507 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF514Q96K75 400 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 LMLNQ96KR4 655 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ART5Q96L15 291 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 PGLYRP3Q96LB9 341 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 AMDHD1Q96NU7 426 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 OR2A7Q96R45 310 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 OR7D2Q96RA2 312 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 F2RL3Q96RI0 385 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms