RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TMED7-TICAM2A0A0A6YYA0 188 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 PLPP2O43688 288 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 SUSD5O60279 629 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 SNX4O95219 450 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 OR2T7P0C7T2 308 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 HOXD12P35452 270 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 MESTQ5EB52 335 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 BICRALQ6AI39 1079 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 MRPL14Q6P1L8 145 aaKnown RBP17.33■□□□□ 0.37
SMPD3-203ENST00000563226 JAZF1Q86VZ6 243 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 ADGRG3Q86Y34 549 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 OR2T27Q8NH04 317 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 HGDQ93099 445 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 RNF32Q9H0A6 362 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 TAS2R10Q9NYW0 307 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 SLC6A5Q9Y345 797 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 TMED7Q9Y3B3 224 aa17.33■□□□□ 0.37
SMPD3-203ENST00000563226 ALPK2Q86TB3 2170 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 ISPDA4D126 451 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 DCTN6O00399 190 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 GAAP10253 952 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 CCL4P13236 92 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 APEHP13798 732 aaKnown RBP17.33■□□□□ 0.36
SMPD3-203ENST00000563226 GRPRP30550 384 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 POLR2HP52434 150 aaKnown RBP17.33■□□□□ 0.36
SMPD3-203ENST00000563226 SLC26A5P58743 744 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 SLC35D3Q5M8T2 416 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 TCEAL6Q6IPX3 200 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 TMEM205Q6UW68 189 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 NR2C2APQ86WQ0 139 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 POC5Q8NA72 575 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 MINDY2Q8NBR6 621 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 OR13C5Q8NGS8 318 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 TCEAL3Q969E4 200 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 SLC25A36Q96CQ1 311 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 PELI1Q96FA3 418 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 SLC26A1Q9H2B4 701 aa17.33■□□□□ 0.36
SMPD3-203ENST00000563226 SLC25A12O75746 678 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 GLCEO94923 617 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 TXNDC12O95881 172 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 GALP22466 123 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 AZGP1P25311 298 aaKnown RBP17.32■□□□□ 0.36
SMPD3-203ENST00000563226 KRR1Q13601 381 aaKnown RBP17.32■□□□□ 0.36
SMPD3-203ENST00000563226 EFR3AQ14156 821 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 DMKNQ6E0U4 476 aaPredicted RBP17.32■□□□□ 0.36
SMPD3-203ENST00000563226 NUP54Q7Z3B4 507 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 ZNF511Q8NB15 262 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 ALG12Q9BV10 488 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 OR11A1Q9GZK7 315 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 TAS2R5Q9NYW4 299 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 PRR32B1ATL7 298 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 C11orf98E9PRG8 122 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 CPNE3O75131 537 aaKnown RBP17.32■□□□□ 0.36
SMPD3-203ENST00000563226 NPIPB7O75200 414 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 HIST1H2ABP04908 130 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 SPNP16150 400 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 MADCAM1Q13477 382 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 CDONQ4KMG0 1287 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 HIST3H2AQ7L7L0 130 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 GRINAQ7Z429 371 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 HIST1H2ACQ93077 130 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 ATF6BQ99941 703 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 NCDNQ9UBB6 729 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 GRHPRQ9UBQ7 328 aa17.32■□□□□ 0.36
SMPD3-203ENST00000563226 SLC25A1P53007 311 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 TAS2R43P59537 309 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 ZFP36L1Q07352 338 aaKnown RBP17.31■□□□□ 0.36
SMPD3-203ENST00000563226 IL10RAQ13651 578 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 IL11RAQ14626 422 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 DTWD2Q8NBA8 298 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 HTRA1Q92743 480 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 TMCO6Q96DC7 493 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 ACOXLQ9NUZ1 547 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 COMMD3Q9UBI1 195 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 TRAPPC4Q9Y296 219 aa17.31■□□□□ 0.36
SMPD3-203ENST00000563226 TEX51A0A1B0GUA7 166 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 A0A1W2PRG6 482 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 PSMD9O00233 223 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 SHC1P29353 583 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 DUSP3P51452 185 aaPredicted RBP17.3■□□□□ 0.36
SMPD3-203ENST00000563226 DDI2Q5TDH0 399 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 ZNF554Q86TJ5 538 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 ABHD4Q8TB40 342 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 CCDC32Q9BV29 185 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 SRRQ9GZT4 340 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 KCNN2Q9H2S1 579 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 SRA1Q9HD15 236 aaKnown RBP17.3■□□□□ 0.36
SMPD3-203ENST00000563226 RXFP3Q9NSD7 469 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 GNG8Q9UK08 70 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 PLGP00747 810 aaPredicted RBP17.3■□□□□ 0.36
SMPD3-203ENST00000563226 RANBP1P43487 201 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 ACTA2P62736 377 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 ACTG2P63267 376 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 GLYR1Q49A26 553 aaPredicted RBP17.3■□□□□ 0.36
SMPD3-203ENST00000563226 C1orf140Q5VVS0 124 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 LYPD8Q6UX82 237 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 SYS1Q8N2H4 156 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 AGBL5Q8NDL9 886 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 SNX33Q8WV41 574 aa17.3■□□□□ 0.36
SMPD3-203ENST00000563226 AP3S1Q92572 193 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms