RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 KPNA2P52292 529 aaKnown RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 SELENOTP62341 195 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 CSNK1G2P78368 415 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 ILKQ13418 452 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 SBK1Q52WX2 424 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 OR2B11Q5JQS5 317 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 SPANXN2Q5MJ10 180 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 MARCH8Q5T0T0 291 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 RAET1LQ5VY80 246 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 OLFML2AQ68BL7 652 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 TIGD3Q6B0B8 471 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 DNM1P46Q6ZS02 220 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 CENPQQ7L2Z9 268 aaPredicted RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 MOB1BQ7L9L4 216 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 FAM220AQ7Z4H9 259 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 HSD17B13Q7Z5P4 300 aaPredicted RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 VRK2Q86Y07 508 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 GTPBP8Q8N3Z3 284 aaPredicted RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 TMEM252Q8N6L7 170 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 CEP112Q8N8E3 955 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF740Q8NDX6 193 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 B3GNT7Q8NFL0 401 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 OR6C4Q8NGE1 309 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 SLC22A8Q8TCC7 542 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 SETD7Q8WTS6 366 aaKnown RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 CHCHD10Q8WYQ3 142 aaPredicted RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 ELMO1Q92556 727 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 NEIL2Q969S2 332 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 RPUSD4Q96CM3 377 aaKnown RBP2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 PAGE5Q96GU1 130 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 SEC22AQ96IW7 307 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 HSFY1Q96LI6 401 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 SIGLEC12Q96PQ1 595 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 SLC29A1Q99808 456 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 PAXXQ9BUH6 204 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 C20orf24Q9BUV8 137 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 TMEM59Q9BXS4 323 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 DEFB126Q9BYW3 111 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 FOLH1BQ9HBA9 442 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 TNFRSF19Q9NS68 423 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 Q9UF83 564 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 VANGL2Q9ULK5 521 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 CA5BQ9Y2D0 317 aa2.39□□□□□ -2.03
SHCBP1-202ENST00000563219 IGHV1OR15-1A0A075B7D0 117 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 FAM168BA1KXE4 195 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 SUPT3HB4E1H0 165 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 CACNG3O60359 315 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 ERLIN2O94905 339 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 IGKV3-15P01624 115 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 GZMAP12544 262 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 GTF2E2P29084 291 aaKnown RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 PRKAR2BP31323 418 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 DDOSTP39656 456 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 TNNT2P45379 298 aaPredicted RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 VDAC2P45880 294 aaPredicted RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 SLC26A2P50443 739 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 CRYBB1P53674 252 aaPredicted RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 DIO3P55073 304 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 C21orf59P57076 290 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 RGS8P57771 180 aaPredicted RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 ACVR1Q04771 509 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 MERTKQ12866 999 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 IDI1Q13907 227 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF77Q15935 545 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 LRRC36Q1X8D7 754 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 VPS26BQ4G0F5 336 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 PRR30Q53SZ7 412 aaPredicted RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 LY6G6FQ5SQ64 297 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 C1orf94Q6P1W5 598 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 SASS6Q6UVJ0 657 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 LUZP2Q86TE4 346 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF546Q86UE3 836 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 OTUD6BQ8N6M0 293 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 OR13F1Q8NGS4 319 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 OR2G2Q8NGZ5 317 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 OR9G1Q8NH87 305 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 PLPPR1Q8TBJ4 325 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 PYROXD1Q8WU10 500 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 MCUR1Q96AQ8 359 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 KIAA1143Q96AT1 154 aaPredicted RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 MED8Q96G25 268 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 PRRC1Q96M27 445 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 CHP1Q99653 195 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 RIOK1Q9BRS2 568 aaKnown RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 TEKT3Q9BXF9 490 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 NCOR1P1Q9H4R4 102 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 EXO5Q9H790 373 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 SUDS3Q9H7L9 328 aaPredicted RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 GEMIN7Q9H840 131 aaKnown RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 BEX1Q9HBH7 125 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 ADAP2Q9NPF8 381 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF275Q9NSD4 429 aaPredicted RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 KCNIP1Q9NZI2 227 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 PDP1Q9P0J1 537 aaPredicted RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 LSM7Q9UK45 103 aaKnown RBP2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 CLEC4EQ9ULY5 219 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 UGT2A1Q9Y4X1 527 aa2.38□□□□□ -2.03
SHCBP1-202ENST00000563219 ADAMTS9Q9P2N4 1935 aa2.37□□□□□ -2.03
SHCBP1-202ENST00000563219 IGHV1OR21-1A0A087WYE8 117 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms