RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 MPIP34949 423 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 PTGDSP41222 190 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 SOX3P41225 446 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 PPICP45877 212 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 HLCSP50747 726 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CLNS1AP54105 237 aaKnown RBP4.09□□□□□ -1.75
SMG1-206ENST00000562668 IRX1P78414 480 aaPredicted RBP4.09□□□□□ -1.75
SMG1-206ENST00000562668 HSPB3Q12988 150 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 RCAN2Q14206 197 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 MAPK11Q15759 364 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 HSPB2Q16082 182 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 MEP1AQ16819 746 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 FAM174BQ3ZCQ3 159 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 LACTB2Q53H82 288 aaPredicted RBP4.09□□□□□ -1.75
SMG1-206ENST00000562668 PAGE3Q5JUK9 113 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 LRIF1Q5T3J3 769 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 AGAP7PQ5VUJ5 663 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 METTL21CQ5VZV1 264 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 SPINK14Q6IE38 97 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 MFSD12Q6NUT3 480 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 TMEM64Q6YI46 380 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 ASB18Q6ZVZ8 466 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 ANKRD46Q86W74 232 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 HPS6Q86YV9 775 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CLEC4FQ8N1N0 589 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 C10orf111Q8N326 155 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 PARP16Q8N5Y8 322 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 SLC5A8Q8N695 610 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 NATD1Q8N6N6 113 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 FAM110BQ8TC76 370 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 RAB40AQ8WXH6 277 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 GTF2H4Q92759 462 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 HGDQ93099 445 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 VPS33AQ96AX1 596 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CHMP6Q96FZ7 201 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 C16orf58Q96GQ5 468 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 ART5Q96L15 291 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 ZNF354BQ96LW1 612 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 AGAP4Q96P64 663 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 TAAR6Q96RI8 345 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 BBS4Q96RK4 519 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 INPP5KQ9BT40 448 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CCDC106Q9BWC9 280 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 HES7Q9BYE0 225 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 DEFB126Q9BYW3 111 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 PAIP1Q9H074 479 aaKnown RBP4.09□□□□□ -1.75
SMG1-206ENST00000562668 NXF5Q9H1B4 397 aaKnown RBP4.09□□□□□ -1.75
SMG1-206ENST00000562668 SLC25A18Q9H1K4 315 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 FOLH1BQ9HBA9 442 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 SAR1AQ9NR31 198 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 RASSF1Q9NS23 344 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 DEPPQ9NTK1 212 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 TAS2R9Q9NYW1 312 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 STMN3Q9NZ72 180 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 BTNL2Q9UIR0 455 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 GAB2Q9UQC2 676 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 ENTPD4Q9Y227 616 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 GMEB1Q9Y692 573 aa4.09□□□□□ -1.75
SMG1-206ENST00000562668 CHCHD2Q9Y6H1 151 aaPredicted RBP4.09□□□□□ -1.75
SMG1-206ENST00000562668 SHANK1Q9Y566 2161 aa4.09□□□□□ -1.76
SMG1-206ENST00000562668 KALRNO60229 2985 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 A0A0G2JMM0 328 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 C2orf92A0A1B0GVN3 265 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 A0A1W2PPB8 328 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 A0A1W2PRS3 328 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 GMNCA6NCL1 334 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 FRG2CA6NGY1 282 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 KIR3DP1A8MWS1 328 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 ZNF587BE7ETH6 402 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 FBP2O00757 339 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 EMC8O43402 210 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 NME2P1O60361 137 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 ZG16O60844 167 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 BCAS2O75934 225 aaPredicted RBP4.08□□□□□ -1.76
SMG1-206ENST00000562668 ALPPP05187 535 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 HMGN2P05204 90 aaKnown RBP4.08□□□□□ -1.76
SMG1-206ENST00000562668 IL6P05231 212 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 ABCB1P08183 1280 aaPredicted RBP4.08□□□□□ -1.76
SMG1-206ENST00000562668 VIMP08670 466 aaKnown RBP4.08□□□□□ -1.76
SMG1-206ENST00000562668 ZCCHC18P0CG32 403 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 SFTPCP11686 197 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 ABCD3P28288 659 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 NTSP30990 170 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 S100A3P33764 101 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 NUP214P35658 2090 aaPredicted RBP4.08□□□□□ -1.76
SMG1-206ENST00000562668 NR0B1P51843 470 aaKnown RBP4.08□□□□□ -1.76
SMG1-206ENST00000562668 POLR2JP52435 117 aaKnown RBP4.08□□□□□ -1.76
SMG1-206ENST00000562668 GNGT1P63211 74 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 FUT5Q11128 374 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 SQLEQ14534 574 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 OR1C1Q15619 314 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 NTRK2Q16620 822 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 DUSP5Q16690 384 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 GTDC1Q4AE62 458 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 PRR30Q53SZ7 412 aaPredicted RBP4.08□□□□□ -1.76
SMG1-206ENST00000562668 PAPPA-AS1Q5QFB9 102 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 ANXA8L1Q5VT79 327 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 SAXO2Q658L1 398 aa4.08□□□□□ -1.76
SMG1-206ENST00000562668 RPUSD3Q6P087 351 aaKnown RBP4.08□□□□□ -1.76
SMG1-206ENST00000562668 TMEM81Q6P7N7 255 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms