RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HIST3H2AQ7L7L0 130 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 PRSS41Q7RTY9 318 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 TMEM52Q8NDY8 209 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 DNAAF1Q8NEP3 725 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 ZPLD1Q8TCW7 415 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 HIST1H2ACQ93077 130 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 PMEPA1Q969W9 287 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 RASD2Q96D21 266 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 OR2A5Q96R48 311 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 TMPRSS13Q9BYE2 586 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 TBC1D29Q9UFV1 150 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 DPP7Q9UHL4 492 aa12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 MRPS2Q9Y399 296 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-202ENST00000561976 OR6C68A6NDL8 312 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 EML2O95834 649 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 CALCBP10092 127 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 ITPKBP27987 946 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 ACAA2P42765 397 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 UBE2MP61081 183 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 ERVK-25P63136 954 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 STAC2Q6ZMT1 411 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 TMPRSS12Q86WS5 348 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 SLC43A2Q8N370 569 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 OR5T3Q8NGG3 340 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 OR10G6Q8NH81 332 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 RGP1Q92546 391 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 MIB2Q96AX9 1013 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 LRFN5Q96NI6 719 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 LMAN2LQ9H0V9 348 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 MED11Q9P086 117 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 DENND4AQ7Z401 1863 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 TP53BP1Q12888 1972 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 TCRBV16S1A1N1A0A5B0 115 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 ANXA2P2A6NMY6 339 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 KCNJ13O60928 360 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 GPR75O95800 540 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 TMIGD3P0DMS9 266 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 SMIM10L1P0DMW3 83 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 PPP3CBP16298 524 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 FAUP35544 74 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 PRICKLE4Q2TBC4 344 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 PCGF3Q3KNV8 242 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 ZCCHC12Q6PEW1 402 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 CFAP77Q6ZQR2 320 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 RTL10Q7L3V2 364 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 C12orf76Q8N812 135 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 NPEPL1Q8NDH3 523 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 OR14C36Q8NHC7 312 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF707Q96C28 371 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 SMIM10Q96HG1 83 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 DPYSL5Q9BPU6 564 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF426Q9BUY5 554 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 SHARPINQ9H0F6 387 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 FGF22Q9HCT0 170 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 TMEM138Q9NPI0 162 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 DNAJB12Q9NXW2 375 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
VPS9D1-202ENST00000561976 C5orf42Q9H799 3197 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 A0A1W2PQU0 124 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 OR6C65A6NJZ3 312 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 GRXCR1A8MXD5 290 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 H3BSH0 61 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 SLC31A1O15431 190 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 B3GALNT1O75752 331 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 RBBP9O75884 186 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 FCER2P06734 321 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 OR8G3PP0DMU2 310 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 VSIG10L2P0DP72 767 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF35P13682 527 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 IGFALSP35858 605 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 ULK3Q6PHR2 472 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 KIRREL2Q6UWL6 708 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 FAM220AQ7Z4H9 259 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 OR52R1Q8NGF1 315 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 C15orf40Q8WUR7 153 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 SLC22A18Q96BI1 424 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 APOOQ9BUR5 198 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 MRI1Q9BV20 369 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 MUC22E2RYF6 1773 aaPredicted RBP12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 SLC22A23A1A5C7 686 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 GOSR2O14653 212 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 MAS1P04201 325 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 RPS21P63220 83 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 GK2Q14410 553 aaPredicted RBP12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 EXOSC6Q5RKV6 272 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 C11orf88Q6PI97 169 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 GSG1LQ6UXU4 331 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 DPY19L2P2Q6ZN68 376 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 GLB1L2Q8IW92 636 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 DND1Q8IYX4 353 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF511Q8NB15 262 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 CAMKVQ8NCB2 501 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF296Q8WUU4 475 aaPredicted RBP12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 PNPLA2Q96AD5 504 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 TM4SF19Q96DZ7 209 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 TOE1Q96GM8 510 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 SLC17A9Q9BYT1 436 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 RXFP3Q9NSD7 469 aa12.78□□□□□ -0.36
VPS9D1-202ENST00000561976 MED9Q9NWA0 146 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms