RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ABCD4O14678 606 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 LGI1O95970 557 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 IFNA8P32881 189 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 ATP5J2P56134 94 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 SF3A3Q12874 501 aaKnown RBP eCLIP14.02□□□□□ -0.17
LMX1B-204ENST00000561065 GABRA6Q16445 453 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 REP15Q6BDI9 236 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 OR7E24Q6IFN5 339 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 B3GLCTQ6Y288 498 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 PTOV1Q86YD1 416 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 OR9K2Q8NGE7 335 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 SMAP2Q8WU79 429 aaPredicted RBP14.02□□□□□ -0.17
LMX1B-204ENST00000561065 SLC38A4Q969I6 547 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 TMEM45BQ96B21 275 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 ELAC2Q9BQ52 826 aaKnown RBP14.02□□□□□ -0.17
LMX1B-204ENST00000561065 PTDSS2Q9BVG9 487 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 ADPRHL2Q9NX46 363 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 CIB4A0PJX0 185 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 TMCC2O75069 709 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 KRT33AO76009 404 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 CD8AP01732 235 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 PAX7P23759 505 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 HTR2AP28223 471 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 CDH11P55287 796 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 PCBP3P57721 371 aaKnown RBP14.01□□□□□ -0.17
LMX1B-204ENST00000561065 EGR4Q05215 589 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 LGALS3BPQ08380 585 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 GLIPR1L2Q4G1C9 344 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 FAM69AQ5T7M9 428 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 CGB2Q6NT52 195 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 ZNF613Q6PF04 617 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 C6orf89Q6UWU4 347 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 CCDC80Q76M96 950 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 WDR31Q8NA23 367 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 C10orf82Q8WW14 230 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 LZICQ8WZA0 190 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 MUS81Q96NY9 551 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 SEC14L4Q9UDX3 406 aa14.01□□□□□ -0.17
LMX1B-204ENST00000561065 TRAV36DV7A0A075B6V5 113 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 A0A1B0GWA3 101 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 CCT8L1PA6NM43 557 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 FTCDNL1E5RQL4 147 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 DYNC1I1O14576 645 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 TPST1O60507 370 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 NDUFS7O75251 213 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 COX4I1P13073 169 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 PTNP21246 168 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 ZNF83P51522 516 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 KRTAP1-1Q07627 177 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 OR1Q1Q15612 314 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 GPAT4Q86UL3 456 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 DTX2Q86UW9 622 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 POMGNT2Q8NAT1 580 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 SMYD1Q8NB12 490 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 OR6S1Q8NH40 331 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 SLC25A36Q96CQ1 311 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 MCHR1Q99705 422 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 BDH2Q9BUT1 245 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 TRAF4Q9BUZ4 470 aaPredicted RBP14□□□□□ -0.17
LMX1B-204ENST00000561065 B3GALT5Q9Y2C3 310 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 CORINQ9Y5Q5 1042 aa14□□□□□ -0.17
LMX1B-204ENST00000561065 HEATR1Q9H583 2144 aaKnown RBP14□□□□□ -0.17
LMX1B-204ENST00000561065 IGKV1D-42A0A075B6H8 117 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 A0A087WUJ7 227 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 E7EQL1 145 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 AIM2O14862 343 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 AKAP8O43823 692 aaKnown RBP13.99□□□□□ -0.17
LMX1B-204ENST00000561065 FZD7O75084 574 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 GMNNO75496 209 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 IGHV4-39P01824 125 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 ZNF43P17038 809 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 CD247P20963 164 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 CD40P25942 277 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 DMTNQ08495 405 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 C1DQ13901 141 aaKnown RBP13.99□□□□□ -0.17
LMX1B-204ENST00000561065 DUSP7Q16829 419 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 LINGO2Q7L985 606 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 AAED1Q7RTV5 226 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 OR2T12Q8NG77 320 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 MPP4Q96JB8 637 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 WFDC6Q9BQY6 131 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 PRR14Q9BWN1 585 aa13.99□□□□□ -0.17
LMX1B-204ENST00000561065 POLR2J2Q9GZM3 115 aaKnown RBP13.99□□□□□ -0.17
LMX1B-204ENST00000561065 POLR2J3Q9H1A7 115 aaKnown RBP13.99□□□□□ -0.17
LMX1B-204ENST00000561065 CISD1Q9NZ45 108 aaKnown RBP13.99□□□□□ -0.17
LMX1B-204ENST00000561065 ELOVL7A1L3X0 281 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 GSTA4O15217 222 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 LSP1P33241 339 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 RPS5P46782 204 aaKnown RBP13.98□□□□□ -0.17
LMX1B-204ENST00000561065 SELENOPP49908 381 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 TNK1Q13470 666 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 SELPLGQ14242 412 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 RABL3Q5HYI8 236 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 C11orf71Q6IPW1 123 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 H1FNTQ75WM6 255 aaPredicted RBP13.98□□□□□ -0.17
LMX1B-204ENST00000561065 EPHX4Q8IUS5 362 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 PIAS4Q8N2W9 510 aaPredicted RBP13.98□□□□□ -0.17
LMX1B-204ENST00000561065 C10orf53Q8N6V4 93 aa13.98□□□□□ -0.17
LMX1B-204ENST00000561065 C1orf162Q8NEQ5 155 aaPredicted RBP13.98□□□□□ -0.17
LMX1B-204ENST00000561065 KTI12Q96EK9 354 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms