RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 UBE2NP61088 152 aaKnown RBP14.13□□□□□ -0.15
SNX1-213ENST00000561026 HMBOX1Q6NT76 420 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 ANKRD16Q6P6B7 361 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 CXXC5Q7LFL8 322 aaKnown RBP14.13□□□□□ -0.15
SNX1-213ENST00000561026 LSMEM1Q8N8F7 131 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 ANKK1Q8NFD2 765 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 C10orf105Q8TEF2 133 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 NANOS1Q8WY41 292 aaKnown RBP14.13□□□□□ -0.15
SNX1-213ENST00000561026 KATNB1Q9BVA0 655 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 C12orf10Q9HB07 376 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 SLC52A3Q9NQ40 469 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 B3GAT1Q9P2W7 334 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 SEC14L4Q9UDX3 406 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 RCE1Q9Y256 329 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 GMEB1Q9Y692 573 aa14.13□□□□□ -0.15
SNX1-213ENST00000561026 A0A096LPE4 126 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 A0A1B0GWA3 101 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 A0A1W2PPZ6 126 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 NR5A2O00482 541 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 CRYAAP02489 173 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 CSF3P09919 207 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 ARAFP10398 606 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 HOXB1P14653 301 aaPredicted RBP14.12□□□□□ -0.15
SNX1-213ENST00000561026 HTR2AP28223 471 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 GTF2E2P29084 291 aaKnown RBP14.12□□□□□ -0.15
SNX1-213ENST00000561026 CLDN17P56750 224 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 VLDLRP98155 873 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 ROR2Q01974 943 aaKnown RBP14.12□□□□□ -0.15
SNX1-213ENST00000561026 C3orf36Q3SXR2 165 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 C6orf52Q5T4I8 152 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 GCNT6Q5T4J0 391 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 REEP3Q6NUK4 255 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 C5orf46Q6UWT4 87 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 COMTD1Q86VU5 262 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 KRT73Q86Y46 540 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 C10orf111Q8N326 155 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 SPATA3Q8NHX4 192 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 NFKBIDQ8NI38 313 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 DNAJA4Q8WW22 397 aaPredicted RBP14.12□□□□□ -0.15
SNX1-213ENST00000561026 TAAR8Q969N4 342 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 SPDL1Q96EA4 605 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 FBXO17Q96EF6 278 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 OXGR1Q96P68 337 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 KCNS3Q9BQ31 491 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 EBF4Q9BQW3 602 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 MOV10Q9HCE1 1003 aaKnown RBP14.12□□□□□ -0.15
SNX1-213ENST00000561026 SLCO1B3Q9NPD5 702 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 CA10Q9NS85 328 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 CCDC167Q9P0B6 97 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 VAPAQ9P0L0 249 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 CRNNQ9UBG3 495 aaPredicted RBP14.12□□□□□ -0.15
SNX1-213ENST00000561026 CUBNO60494 3623 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 STAB1Q9NY15 2570 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 ARFGEF3Q5TH69 2177 aa14.12□□□□□ -0.15
SNX1-213ENST00000561026 IGKV1D-42A0A075B6H8 117 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 LOC102725191A0A1B0GVB3 256 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 RPL36A-HNRNPH2H7BZ11 118 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 LY6HO94772 140 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 IGLV1-44P01699 117 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 PPIBP23284 216 aaKnown RBP14.11□□□□□ -0.15
SNX1-213ENST00000561026 SERPINF1P36955 418 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 SH3BGRP55822 239 aaPredicted RBP14.11□□□□□ -0.15
SNX1-213ENST00000561026 CDK6Q00534 326 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 PAGE3Q5JUK9 113 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 FAM69AQ5T7M9 428 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 AGBL2Q5U5Z8 902 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 DHRS4L2Q6PKH6 230 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 NET1Q7Z628 596 aaPredicted RBP14.11□□□□□ -0.15
SNX1-213ENST00000561026 FAM169BQ8N8A8 192 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 LRRC8CQ8TDW0 803 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 PROX1Q92786 737 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 SLC38A4Q969I6 547 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 CCDC28BQ9BUN5 200 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 SPATA5L1Q9BVQ7 753 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 NELFAQ9H3P2 528 aa14.11□□□□□ -0.15
SNX1-213ENST00000561026 TRAV36DV7A0A075B6V5 113 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 TRBV5-3A0A0A0MS03 114 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 M0R082 166 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 AIM2O14862 343 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 TPST1O60507 370 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 SLC43A1O75387 559 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 IFNA2P01563 188 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 CECR9P0C854 216 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 GPX2P18283 190 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 SNRPD2P62316 118 aaKnown RBP14.1□□□□□ -0.15
SNX1-213ENST00000561026 TUBA1BP68363 451 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 TUBA4AP68366 448 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 ARF1P84077 181 aaKnown RBP14.1□□□□□ -0.15
SNX1-213ENST00000561026 NAAAQ02083 359 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 C1DQ13901 141 aaKnown RBP14.1□□□□□ -0.15
SNX1-213ENST00000561026 CHRFAM7AQ494W8 412 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 GLIPR1L2Q4G1C9 344 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 ALG10BQ5I7T1 473 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 PODNL1Q6PEZ8 512 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 ULK3Q6PHR2 472 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 TUBA1AQ71U36 451 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 H1FNTQ75WM6 255 aaPredicted RBP14.1□□□□□ -0.15
SNX1-213ENST00000561026 ZNF417Q8TAU3 575 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 ZNF587Q96SQ5 575 aaPredicted RBP14.1□□□□□ -0.15
SNX1-213ENST00000561026 PRR14Q9BWN1 585 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms