RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 OAFQ86UD1 273 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TPRA1Q86W33 373 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TMEM25Q86YD3 366 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TRAPPC5Q8IUR0 188 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GID4Q8IVV7 300 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CCDC28AQ8IWP9 274 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SLC43A2Q8N370 569 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CADM2Q8N3J6 435 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 Q8N402 240 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TMEM99Q8N816 258 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 LMNTD1Q8N9Z9 388 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TEX19Q8NA77 164 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR4M2Q8NGB6 313 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR5D16Q8NGK9 328 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR5AR1Q8NGP9 310 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR2L8Q8NGY9 312 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR4Q3Q8NH05 313 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR5K2Q8NHB8 316 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 MAFAQ8NHW3 353 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 NEIL3Q8TAT5 605 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CD99L2Q8TCZ2 262 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 RPS4Y2Q8TD47 263 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 BRIX1Q8TDN6 353 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 ELP5Q8TE02 316 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GANCQ8TET4 914 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SPRYD4Q8WW59 207 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 HSD17B8Q92506 261 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OSTF1Q92882 214 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 RFT1Q96AA3 541 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 EXOSC8Q96B26 276 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 GIMAP5Q96F15 307 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PGLYRP3Q96LB9 341 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 C10orf90Q96M02 699 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 HYLS1Q96M11 299 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 LRFN5Q96NI6 719 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 AMDHD1Q96NU7 426 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 IL17FQ96PD4 163 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SLC38A2Q96QD8 506 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR2M2Q96R28 347 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 F2RL3Q96RI0 385 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 DHRS9Q9BPW9 319 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 C7orf50Q9BRJ6 194 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 DPH7Q9BTV6 452 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 FAIM2Q9BWQ8 316 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 RAB11FIP5Q9BXF6 653 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 BEX2Q9BXY8 128 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TWSG1Q9GZX9 223 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OR2AG1Q9H205 316 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 KCNN2Q9H2S1 579 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GHITMQ9H3K2 345 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 OSGEPL1Q9H4B0 414 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 C6orf106Q9H6K1 298 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 EVA1AQ9H8M9 152 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 HEXA-AS1Q9H8Q6 139 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ERVMER34-1Q9H9K5 563 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SLC28A3Q9HAS3 691 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 FOLH1BQ9HBA9 442 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 HINT3Q9NQE9 182 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 RPRD1BQ9NQG5 326 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 SLC35C2Q9NQQ7 365 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 INPP5EQ9NRR6 644 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ZNF275Q9NSD4 429 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 ZCCHC3Q9NUD5 404 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 MCUBQ9NWR8 336 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 LYARQ9NX58 379 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 SLCO1C1Q9NYB5 712 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TVP23BQ9NYZ1 205 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 STMN3Q9NZ72 180 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CALML5Q9NZT1 146 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 CNIH4Q9P003 139 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 C5AR2Q9P296 337 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 COPZ2Q9P299 210 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 NLKQ9UBE8 527 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 EIF3KQ9UBQ5 218 aaKnown RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 TAC3Q9UHF0 121 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 ZNF223Q9UK11 482 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 NUP50Q9UKX7 468 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TBX21Q9UL17 535 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 SLC27A6Q9Y2P4 619 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 GPR52Q9Y2T5 361 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 PCYT1BQ9Y5K3 369 aaPredicted RBP2.25□□□□□ -2.05
SPG11-223ENST00000560858 STON1Q9Y6Q2 735 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 HEATR5AQ86XA9 2040 aa2.25□□□□□ -2.05
SPG11-223ENST00000560858 TRAV1-2A0A0B4J238 106 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 LOC102723532A0A0G2JNH3 316 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 EDDM13A0A1B0GTR0 161 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 LOC105371267A0A1B0GV96 52 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 A0A1B0GVI7 797 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 LINC00854A0A1B0GVQ3 168 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 FAM240BA0A1B0GVZ2 78 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 ABHD14A-ACY1A0A1B0GW23 586 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SMIM30A4D0T7 59 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 GSAPA4D1B5 854 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 TRAPPC13A5PLN9 417 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 LRIT2A6NDA9 550 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 OR5K3A6NET4 321 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 PRR23AA6NEV1 266 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 SLC9B1P1A6NJY1 282 aa2.24□□□□□ -2.05
SPG11-223ENST00000560858 CPSF4LA6NMK7 179 aaKnown RBP2.24□□□□□ -2.05
SPG11-223ENST00000560858 C12orf71A8MTZ7 269 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms