RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RXFP4Q8TDU9 374 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 GCDHQ92947 438 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 TSNAXQ99598 290 aaKnown RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ENKD1Q9H0I2 346 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ABCG5Q9H222 651 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 REEP1Q9H902 201 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 GPR132Q9UNW8 380 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 FAM96BQ9Y3D0 163 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 LOC100509620A0A075B734 347 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 LOC285095A0A1B0GVY8 99 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 AHRRA9YTQ3 701 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 MCRIP1C9JLW8 97 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 M0QYV0 167 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SSNA1O43805 119 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 VTNP04004 478 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SEMG1P04279 462 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 TCRBP04435 133 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 HEXAP06865 529 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 RD3LP0DJH9 198 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 CXCL8P10145 99 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 PIPP12273 146 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 FCGR2AP12318 317 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 GABRA1P14867 456 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 S1PR1P21453 382 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 PRR5P85299 388 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF177Q13360 481 aaPredicted RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 GUCA2BQ16661 112 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 CDNFQ49AH0 187 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 PIP5KL1Q5T9C9 394 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF549Q6P9A3 640 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 LHFPL3Q86UP9 236 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 COMTD1Q86VU5 262 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 MSRB3Q8IXL7 192 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 PXT1Q8NFP0 134 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 MCHR2Q969V1 340 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 TCEAL4Q96EI5 215 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 KCTD7Q96MP8 289 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 PRDM7Q9NQW5 492 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 HEBP1Q9NRV9 189 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 C1orf109Q9NX04 203 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 METTL1Q9UBP6 276 aaKnown RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 MRPS33Q9Y291 106 aaKnown RBP6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 B3GALT5Q9Y2C3 310 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 SLC9A8Q9Y2E8 581 aa6.16□□□□□ -1.42
TSPAN3-209ENST00000560715 DENND4AQ7Z401 1863 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 C4orf47A7E2U8 309 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 WASH3PC4AMC7 463 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 F8W735 103 aaPredicted RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 K7ERQ8 282 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 DPM1O60762 260 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 CSO75390 466 aaKnown RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 PEX11BO96011 259 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 EGFP01133 1207 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 IFNGP01579 166 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 MBP02144 154 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 MMP3P08254 477 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF286BP0CG31 522 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 CBSLP0DN79 551 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 GNSP15586 552 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 GOT1P17174 413 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 S100A11P31949 105 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 CBSP35520 551 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 CSNK1EP49674 416 aaKnown RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 GZMMP51124 257 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 CTBP2P56545 445 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF33AQ06730 810 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 MLLT11Q13015 90 aaPredicted RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 IRF4Q15306 451 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 C22orf42Q6IC83 251 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 CIR1Q86X95 450 aaPredicted RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 SPNS2Q8IVW8 549 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 NAGSQ8N159 534 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 ARRDC1Q8N5I2 433 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 C11orf65Q8NCR3 313 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 MSI2Q96DH6 328 aaKnown RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 C12orf66Q96MD2 445 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF599Q96NL3 588 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 TAAR6Q96RI8 345 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 EPYCQ99645 322 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 SMOQ99835 787 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 NLNQ9BYT8 704 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 NSUN3Q9H649 340 aaKnown RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 AGO3Q9H9G7 860 aaKnown RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 RNF122Q9H9V4 155 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 SLC25A37Q9NYZ2 338 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 PPP4R1LQ9P1A2 415 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 DHCR7Q9UBM7 475 aaKnown RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 SIX4Q9UIU6 781 aa6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 MYO18AQ92614 2054 aaKnown RBP6.15□□□□□ -1.42
TSPAN3-209ENST00000560715 PDCD11Q14690 1871 aaKnown RBP6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 TRIP11Q15643 1979 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 A0A1B0GTL3 188 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 FAM230AA0A1W2PPH8 454 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 HSPB2A8KAH6 182 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 E9PI62 339 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 H0Y8G0 127 aa6.15□□□□□ -1.43
TSPAN3-209ENST00000560715 TCAPO15273 167 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms