RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 HIPK2Q9H2X6 1198 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 ARGFXA6NJG6 315 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 LUMP51884 338 aaPredicted RBP12.46□□□□□ -0.41
TRAF3-208ENST00000560371 OR8B8Q15620 311 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 COX15Q7KZN9 410 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 CD300LBA8K4G0 201 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 AKAIN1P0CW23 69 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 ACP2P11117 423 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 PRKAR1BP31321 381 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 NFATC3Q12968 1075 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 MFAP5Q13361 173 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 AGAP6Q5VW22 663 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 MED20Q9H944 212 aa12.46□□□□□ -0.41
TRAF3-208ENST00000560371 TMEM212A6NML5 194 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 MKRN2OSH3BPM6 223 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 PLPP1O14494 284 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 TAPBPO15533 448 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 IFNA17P01571 189 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 NUDT7P0C024 238 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 SLC19A1P41440 591 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 F2RL1P55085 397 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 GPR85P60893 370 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 IL13RA1P78552 427 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 MBOAT2Q6ZWT7 520 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 SLC29A1Q99808 456 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 OLAHQ9NV23 265 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 STEAP1Q9UHE8 339 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 TRAPPC2LQ9UL33 140 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 IGHV3-20A0A0C4DH32 117 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 FOXD2O60548 495 aaPredicted RBP12.46□□□□□ -0.42
TRAF3-208ENST00000560371 CSF1P09603 554 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 FKBP2P26885 142 aaKnown RBP12.46□□□□□ -0.42
TRAF3-208ENST00000560371 LIM2P55344 173 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 MRPL58Q14197 206 aaKnown RBP12.46□□□□□ -0.42
TRAF3-208ENST00000560371 MEF2DQ14814 521 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 VWA2Q5GFL6 755 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 WDSUB1Q8N9V3 476 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 SLC7A13Q8TCU3 470 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 SULT4A1Q9BR01 284 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 EDEM2Q9BV94 578 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 PBDC1Q9BVG4 233 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 MYOTQ9UBF9 498 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 MOKQ9UQ07 419 aa12.46□□□□□ -0.42
TRAF3-208ENST00000560371 SIPA1L3O60292 1781 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-208ENST00000560371 LINC01565O15544 149 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 EDN3P14138 238 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 IL10RAQ13651 578 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 ZNF681Q96N22 645 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 OR5B12Q96R08 314 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 CMSS1Q9BQ75 279 aaKnown RBP12.45□□□□□ -0.42
TRAF3-208ENST00000560371 BCL7BQ9BQE9 202 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 ZFC3H1O60293 1989 aaKnown RBP12.45□□□□□ -0.42
TRAF3-208ENST00000560371 LRRC30A6NM36 301 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 FAM166BA8MTA8 275 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 ITGAMP11215 1152 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 PTGER4P35408 488 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 CXADRP78310 365 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 AARDQ4LEZ3 155 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 METTL11BQ5VVY1 283 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 GOT1L1Q8NHS2 421 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-208ENST00000560371 TNFRSF13CQ96RJ3 184 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 A8MVM7 634 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 SC5DO75845 299 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 CAMLGP49069 296 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 CENPOQ9BU64 300 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 A0A1B0GWA3 101 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 ENSAO43768 121 aaKnown RBP12.45□□□□□ -0.42
TRAF3-208ENST00000560371 TP53P04637 393 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-208ENST00000560371 OR2T7P0C7T2 308 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 TAS2R20P59543 309 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 LCN10Q6JVE6 187 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 MARCH3Q86UD3 253 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 SLC16A11Q8NCK7 471 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 OR2T27Q8NH04 317 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 GCM1Q9NP62 436 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 GNG12Q9UBI6 72 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 NPFFR2Q9Y5X5 522 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 A0A1W2PPC4 97 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 B3GALT4O96024 378 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 PRKACBP22694 351 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 SF3A2Q15428 464 aaKnown RBP12.45□□□□□ -0.42
TRAF3-208ENST00000560371 LRRC56Q8IYG6 542 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-208ENST00000560371 SIMC1Q8NDZ2 872 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 H7C1C5 153 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 GASTP01350 101 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 OR8G3PP0DMU2 310 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 IL7P13232 177 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 TAS2R31P59538 309 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 LCN6P62502 163 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 NPSR1Q6W5P4 371 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 S100A7AQ86SG5 101 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 FRMD1Q8N878 549 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 FAM83FQ8NEG4 500 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-208ENST00000560371 OR2T11Q8NH01 316 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 UBTD2Q8WUN7 234 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 RASD1Q9Y272 281 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 USP54Q70EL1 1684 aa12.45□□□□□ -0.42
TRAF3-208ENST00000560371 COL11A1P12107 1806 aaPredicted RBP12.44□□□□□ -0.42
TRAF3-208ENST00000560371 SLC10A1Q14973 349 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms