RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 RGS16O15492 202 aaPredicted RBP11.35□□□□□ -0.59
TPM1-220ENST00000559556 UPK3AO75631 287 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 ZNF432O94892 652 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 TGFAP01135 160 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 C8BP07358 591 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 TACSTD2P09758 323 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 ZCCHC18P0CG32 403 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 PNMTP11086 282 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 DSTNP60981 165 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 ROR2Q01974 943 aaKnown RBP11.35□□□□□ -0.59
TPM1-220ENST00000559556 HGFACQ04756 655 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 EGR4Q05215 589 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 MPP2Q14168 576 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 SQLEQ14534 574 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 LARS2Q15031 903 aaKnown RBP11.35□□□□□ -0.59
TPM1-220ENST00000559556 CR1LQ2VPA4 569 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 IQCCQ4KMZ1 466 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 WDR93Q6P2C0 686 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 SERPINA11Q86U17 422 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 CLIP4Q8N3C7 705 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 SLC38A5Q8WUX1 472 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 SLC35B4Q969S0 331 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 ZBTB18Q99592 522 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 PTDSS2Q9BVG9 487 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 SPATA9Q9BWV2 254 aa11.35□□□□□ -0.59
TPM1-220ENST00000559556 A0A096LPE4 126 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 IGHV2OR16-5A0A0B4J2B6 119 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 A0A1W2PPZ6 126 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 hCG_2039718K7EN88 272 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 AHSA1O95433 338 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 STAMBPO95630 424 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 IL6P05231 212 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 CELA3BP08861 270 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 NCF2P19878 526 aaPredicted RBP11.34□□□□□ -0.59
TPM1-220ENST00000559556 EPHA3P29320 983 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 CRATP43155 626 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 CLDN17P56750 224 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 PDCD4Q53EL6 469 aaKnown RBP11.34□□□□□ -0.59
TPM1-220ENST00000559556 TNFAIP8L3Q5GJ75 292 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 RPS26P11Q5JNZ5 115 aaPredicted RBP11.34□□□□□ -0.59
TPM1-220ENST00000559556 VHLLQ6RSH7 139 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 C6orf89Q6UWU4 347 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 NEU4Q8WWR8 484 aaPredicted RBP11.34□□□□□ -0.59
TPM1-220ENST00000559556 HPS1Q92902 700 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 TMEM19Q96HH6 336 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 DOK1Q99704 481 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 ARMC7Q9H6L4 198 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 THUMPD1Q9NXG2 353 aaKnown RBP11.34□□□□□ -0.59
TPM1-220ENST00000559556 B3GAT1Q9P2W7 334 aa11.34□□□□□ -0.59
TPM1-220ENST00000559556 TGP01266 2768 aa11.33□□□□□ -0.59
TPM1-220ENST00000559556 A0A0G2JPF8 293 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 TMEM129A0AVI4 362 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 LRP5LA4QPB2 252 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 ZNF503-AS2A6NEH8 195 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 TRPC5OSA6NMA1 111 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 HNRNPCL2B2RXH8 293 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 HNRNPCL3B7ZW38 293 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 HAX1O00165 279 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 HDAC3O15379 428 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 HNRNPCL1O60812 293 aaKnown RBP11.33□□□□□ -0.6
TPM1-220ENST00000559556 LILRA1O75019 489 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 SLC43A1O75387 559 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 ERCC1P07992 297 aaPredicted RBP11.33□□□□□ -0.6
TPM1-220ENST00000559556 IGFBP1P08833 259 aaPredicted RBP11.33□□□□□ -0.6
TPM1-220ENST00000559556 HNRNPCL4P0DMR1 293 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 IDO1P14902 403 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 DAOP14920 347 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 CBR1P16152 277 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 ZNF43P17038 809 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 NPR2P20594 1047 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 GTF2E2P29084 291 aaKnown RBP11.33□□□□□ -0.6
TPM1-220ENST00000559556 IL2RGP31785 369 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 THBS4P35443 961 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 RPS5P46782 204 aaKnown RBP11.33□□□□□ -0.6
TPM1-220ENST00000559556 CHN2P52757 468 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 ARF1P84077 181 aaKnown RBP11.33□□□□□ -0.6
TPM1-220ENST00000559556 POU3F1Q03052 451 aaPredicted RBP11.33□□□□□ -0.6
TPM1-220ENST00000559556 MSANTD1Q6ZTZ1 278 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 KDM8Q8N371 416 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 ZNF786Q8N393 782 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 SVOPLQ8N434 492 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 RFLNBQ8N5W9 214 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 VPS33AQ96AX1 596 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 ANKRD27Q96NW4 1050 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 OXGR1Q96P68 337 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 WDR55Q9H6Y2 383 aaPredicted RBP11.33□□□□□ -0.6
TPM1-220ENST00000559556 TPT1P8Q9HAU6 139 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 C12orf10Q9HB07 376 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 GPR35Q9HC97 309 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 SEC14L4Q9UDX3 406 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 ZNF232Q9UNY5 417 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 IFT52Q9Y366 437 aa11.33□□□□□ -0.6
TPM1-220ENST00000559556 TRRAPQ9Y4A5 3859 aa11.32□□□□□ -0.6
TPM1-220ENST00000559556 TRAF3IP2O43734 574 aaPredicted RBP11.32□□□□□ -0.6
TPM1-220ENST00000559556 SNNO75324 88 aaPredicted RBP11.32□□□□□ -0.6
TPM1-220ENST00000559556 ANP32DO95626 131 aa11.32□□□□□ -0.6
TPM1-220ENST00000559556 ARR3P36575 388 aa11.32□□□□□ -0.6
TPM1-220ENST00000559556 RIN1Q13671 783 aa11.32□□□□□ -0.6
TPM1-220ENST00000559556 CEACAM16Q2WEN9 425 aa11.32□□□□□ -0.6
TPM1-220ENST00000559556 FAM69AQ5T7M9 428 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms