RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, human

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG21-208	ENST00000558943	TTC4	O95801	387 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ANGPTL1	O95841	491 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	NGF	P01138	241 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	IGHV3-9	P01782	118 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	GBA	P04062	536 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	GYPC	P04921	128 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ATP1B1	P05026	303 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ALOX5	P09917	674 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ZSCAN5DP	P0CG00	497 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	CT45A8	P0DMV1	189 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	CT45A9	P0DMV2	189 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	NCF1	P14598	390 aa	Predicted RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ACHE	P22303	614 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	FPR3	P25089	353 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	EIF1	P41567	113 aa	Known RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	RFX3	P48380	749 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ATP4B	P51164	291 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	PSMD4	P55036	377 aa	Known RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	UBASH3A	P57075	661 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	TPM4	P67936	248 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	PHEX	P78562	749 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	CDK16	Q00536	496 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	TGFBR3	Q03167	851 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	SNX1	Q13596	522 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	DECR1	Q16698	335 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	TMEM176B	Q3YBM2	270 aa	Predicted RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	SLC9B1	Q4ZJI4	515 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	CT45A2	Q5DJT8	189 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	REP15	Q6BDI9	236 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	KLHL24	Q6TFL4	600 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	C16orf54	Q6UWD8	224 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	MEPCE	Q7L2J0	689 aa	Known RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	GSTA5	Q7RTV2	222 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	TRABD2A	Q86V40	505 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	CARM1	Q86X55	608 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	NUDT13	Q86X67	352 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	LAS2	Q8IYD9	372 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	OR8H2	Q8N162	312 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	RIBC1	Q8N443	379 aa	Predicted RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	NKAP	Q8N5F7	415 aa	Known RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	UBL4B	Q8N7F7	174 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	WDR31	Q8NA23	367 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ATP6V1C2	Q8NEY4	427 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	OR7G3	Q8NG95	312 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	OR4F15	Q8NGB8	312 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	OR4N2	Q8NGD1	307 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	RNF138	Q8WVD3	245 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	APH1A	Q96BI3	265 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	RAB39B	Q96DA2	213 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ARL5B	Q96KC2	179 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	C1orf147	Q96MC9	270 aa	Predicted RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	RNF145	Q96MT1	663 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ANKRD27	Q96NW4	1050 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	BBS4	Q96RK4	519 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	CHP1	Q99653	195 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	PSD2	Q9BQI7	771 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	GATA5	Q9BWX5	397 aa	Predicted RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ZNF717	Q9BY31	904 aa	Predicted RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	RACGAP1	Q9H0H5	632 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	TPK1	Q9H3S4	243 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ZNF665	Q9H7R5	613 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	DDX31	Q9H8H2	851 aa	Known RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	FAM120C	Q9NX05	1096 aa	Known RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	PLEK2	Q9NYT0	353 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	MAT2B	Q9NZL9	334 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	EMC3	Q9P0I2	261 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	CTNNAL1	Q9UBT7	734 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ZMAT5	Q9UDW3	170 aa	Known RBP	4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	OPN4	Q9UHM6	478 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ZNF639	Q9UID6	485 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ICAM5	Q9UMF0	924 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	OARD1	Q9Y530	152 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	PCDHGB5	Q9Y5G0	923 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	SNX5	Q9Y5X3	404 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	ZNF780B	Q9Y6R6	833 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	HYDIN	Q4G0P3	5121 aa		4.05	□□□□□ -1.76
SPG21-208	ENST00000558943	IGLV3-32	A0A0A0MS00	114 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943		A0A0A6YYD5	115 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	IGHV3-15	A0A0B4J1V0	119 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	ZCWPW2	A0A1B0GU75	182 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943		A0A1W2PRB8	838 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	ZNF724	A8MTY0	619 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	KLF11	O14901	512 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	LIAS	O43766	372 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	CCNT2	O60583	730 aa	Known RBP	4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	TOMM40	O96008	361 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	OPN1MW	P04001	364 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	TPM1	P09493	284 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	OPN1MW2	P0DN77	364 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	OPN1MW3	P0DN78	364 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	EDNRA	P25101	427 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	EPHA3	P29320	983 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	SLC7A1	P30825	629 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	BSG	P35613	385 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	GGT5	P36269	586 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	PIK3CB	P42338	1070 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	RAD52	P43351	418 aa		4.04	□□□□□ -1.76
SPG21-208	ENST00000558943	HSPA7	P48741	367 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms