RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TMEM181Q9P2C4 612 aa4.81□□□□□ -1.64
RTF1-204ENST00000558117 SPRR3Q9UBC9 169 aa4.81□□□□□ -1.64
RTF1-204ENST00000558117 CACNG5Q9UF02 275 aa4.81□□□□□ -1.64
RTF1-204ENST00000558117 C2orf92A0A1B0GVN3 265 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 ANKRD61A6NGH8 418 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 C2orf74A8MZ97 194 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 G3V4G9 280 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 ZNF354AO60765 605 aaPredicted RBP4.8□□□□□ -1.64
RTF1-204ENST00000558117 MTX2O75431 263 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 CDK14O94921 469 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 AP2A2O94973 939 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 PGLSO95336 258 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 MBD3O95983 291 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 GPIP06744 558 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 CMA1P23946 247 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 CASP1P29466 404 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 SPINT3P49223 89 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 ZNF75DP51815 510 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 GBX2P52951 348 aaPredicted RBP4.8□□□□□ -1.64
RTF1-204ENST00000558117 CA9Q16790 459 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 PARP15Q460N3 678 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 RESP18Q5W5W9 173 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 CLEC2AQ6UVW9 174 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 FAM183BPQ6ZVS7 135 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 RTN4RL2Q86UN3 420 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 RPS19BP1Q86WX3 136 aaKnown RBP4.8□□□□□ -1.64
RTF1-204ENST00000558117 FAM131BQ86XD5 332 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 ZNF397Q8NF99 534 aaPredicted RBP4.8□□□□□ -1.64
RTF1-204ENST00000558117 FLVCR1-AS1Q8TAF5 88 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 M1APQ8TC57 530 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 PHLDA1Q8WV24 401 aaPredicted RBP4.8□□□□□ -1.64
RTF1-204ENST00000558117 CCDC107Q8WV48 283 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 LCN9Q8WX39 176 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 CTNNBL1Q8WYA6 563 aaPredicted RBP4.8□□□□□ -1.64
RTF1-204ENST00000558117 PROX1Q92786 737 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 C12orf66Q96MD2 445 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 ZNF285Q96NJ3 590 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 BTBD9Q96Q07 612 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 CPXM1Q96SM3 734 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 NAP1L3Q99457 506 aaPredicted RBP4.8□□□□□ -1.64
RTF1-204ENST00000558117 MED18Q9BUE0 208 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 RSPO3Q9BXY4 272 aaPredicted RBP4.8□□□□□ -1.64
RTF1-204ENST00000558117 CLSTN2Q9H4D0 955 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 ESM1Q9NQ30 184 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 FAM212BQ9NTI7 297 aaPredicted RBP4.8□□□□□ -1.64
RTF1-204ENST00000558117 SLCO1C1Q9NYB5 712 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 FAM153AQ9UHL3 310 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 RNF150Q9ULK6 438 aa4.8□□□□□ -1.64
RTF1-204ENST00000558117 IGHV4-4A0A075B6R2 117 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 A0A1B0GWJ7 208 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 A0A1W2PPQ1 181 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 CFAP73A6NFT4 308 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 BOLA2-SMG1P6H3BVE0 249 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 POLR2DO15514 142 aaKnown RBP4.79□□□□□ -1.64
RTF1-204ENST00000558117 POP7O75817 140 aaKnown RBP4.79□□□□□ -1.64
RTF1-204ENST00000558117 CCDC159P0C7I6 412 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 UGT2B7P16662 529 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 LBPP18428 481 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 CA6P23280 308 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 AZGP1P25311 298 aaKnown RBP4.79□□□□□ -1.64
RTF1-204ENST00000558117 MAGEA5P43359 124 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 SYKP43405 635 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 MAPK12P53778 367 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 ENPEPQ07075 957 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 CETN1Q12798 172 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 COX10Q12887 443 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 CHIT1Q13231 466 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 PNOCQ13519 176 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 RIPK1Q13546 671 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 FAM189A2Q15884 450 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 SLC25A52Q3SY17 297 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 IFI44LQ53G44 452 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 LBHQ53QV2 105 aaPredicted RBP4.79□□□□□ -1.64
RTF1-204ENST00000558117 BOLA3Q53S33 107 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 TEX35Q5T0J7 233 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 PRMT9Q6P2P2 845 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 LANCL3Q6ZV70 420 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 CPEB2Q7Z5Q1 589 aaKnown RBP4.79□□□□□ -1.64
RTF1-204ENST00000558117 SLC22A16Q86VW1 577 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 AMZ2Q86W34 360 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 CDK20Q8IZL9 346 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 BATF2Q8N1L9 274 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 UMODL1-AS1Q8N2C9 162 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 TMEM251Q8N6I4 163 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 ZDHHC22Q8N966 263 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 CCNYQ8ND76 341 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 C10orf105Q8TEF2 133 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 SYN2Q92777 582 aaPredicted RBP4.79□□□□□ -1.64
RTF1-204ENST00000558117 RIT1Q92963 219 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 GLYATL1Q969I3 302 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 ANKRD9Q96BM1 317 aaPredicted RBP4.79□□□□□ -1.64
RTF1-204ENST00000558117 PSKH2Q96QS6 385 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 PANX3Q96QZ0 392 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 FEVQ99581 238 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 RAB11FIP5Q9BXF6 653 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 TTTY12Q9BZ98 90 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 EGLN1Q9GZT9 426 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 WWP1Q9H0M0 922 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 FN3KQ9H479 309 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 LRRC19Q9H756 370 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms