RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 INIPQ9NRY2 104 aa15.13■□□□□ 0.01
SNX1-203ENST00000558040 TAS2R5Q9NYW4 299 aa15.13■□□□□ 0.01
SNX1-203ENST00000558040 NPIPA1Q9UND3 350 aa15.13■□□□□ 0.01
SNX1-203ENST00000558040 ASPMQ8IZT6 3477 aa15.13■□□□□ 0.01
SNX1-203ENST00000558040 A0A1W2PNV4 684 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 AQP7P3A6NL99 342 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 MCIDASD6RGH6 385 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 AQP7O14520 342 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 IDH3BO43837 385 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 PPP1R3DO95685 299 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 CD14P08571 375 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 APEHP13798 732 aaKnown RBP15.12■□□□□ 0.01
SNX1-203ENST00000558040 AHCYP23526 432 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 EIF1AXP47813 144 aaKnown RBP15.12■□□□□ 0.01
SNX1-203ENST00000558040 SUCLG1P53597 346 aaKnown RBP15.12■□□□□ 0.01
SNX1-203ENST00000558040 CLDN18P56856 261 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 CTXN1P60606 82 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 ZNF239Q16600 458 aaKnown RBP15.12■□□□□ 0.01
SNX1-203ENST00000558040 LRRC75AQ8NAA5 344 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 ANKK1Q8NFD2 765 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 OR4Q3Q8NH05 313 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 OR10D3Q8NH80 312 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 TRUB1Q8WWH5 349 aaKnown RBP15.12■□□□□ 0.01
SNX1-203ENST00000558040 ERMAPQ96PL5 475 aaPredicted RBP15.12■□□□□ 0.01
SNX1-203ENST00000558040 KATNB1Q9BVA0 655 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 POLDIP3Q9BY77 421 aaKnown RBP15.12■□□□□ 0.01
SNX1-203ENST00000558040 ENKD1Q9H0I2 346 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 SLC25A18Q9H1K4 315 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 TSPAN10Q9H1Z9 355 aaPredicted RBP15.12■□□□□ 0.01
SNX1-203ENST00000558040 NRIP3Q9NQ35 241 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 PLSCR2Q9NRY7 297 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 TVP23BQ9NYZ1 205 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 LUZP4Q9P127 313 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 SEC14L4Q9UDX3 406 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 RASD1Q9Y272 281 aa15.12■□□□□ 0.01
SNX1-203ENST00000558040 A0A1W2PRG6 482 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 C11orf98E9PRG8 122 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 IMPA2O14732 288 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 ARPC3O15145 178 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 VAMP5O95183 116 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 IFNGP01579 166 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 CPN1P15169 458 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 ENPP1P22413 925 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 PCYT1AP49585 367 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 AGFG1P52594 562 aaKnown RBP15.11■□□□□ 0.01
SNX1-203ENST00000558040 SRYQ05066 204 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 PDK3Q15120 406 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 SNAPC1Q16533 368 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 GPR139Q6DWJ6 353 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 TMEM225Q6GV28 225 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 ACSM5Q6NUN0 579 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 C19orf48Q6RUI8 117 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 PTCHD4Q6ZW05 846 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 CHMP1BQ7LBR1 199 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 PXKQ7Z7A4 578 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 IGFN1Q86VF2 1251 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 TMEM99Q8N816 258 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 OR8J1Q8NGP2 316 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 SARAFQ96BY9 339 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 TIMP4Q99727 224 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 FANCFQ9NPI8 374 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 SPRR3Q9UBC9 169 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 IER3IP1Q9Y5U9 82 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 CELSR3Q9NYQ7 3312 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 FREM3P0C091 2139 aa15.11■□□□□ 0.01
SNX1-203ENST00000558040 NPIPB13A6NJU9 1138 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 RIIAD1A6NNX1 92 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 NPIPB4C9JG80 1138 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 H0YC42 278 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 ERVH48-1M5A8F1 160 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 SURF4O15260 269 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 CXCL13O43927 109 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 SYNGR4O95473 234 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 F13BP05160 661 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 SDHAP31040 664 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 CLDN15P56746 228 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 ISL1P61371 349 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 H3F3AP84243 136 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 KLRB1Q12918 225 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 KRTCAP3Q53RY4 240 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 EMC4Q5J8M3 183 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 CCDC71Q8IV32 467 aaPredicted RBP15.1■□□□□ 0.01
SNX1-203ENST00000558040 UEVLDQ8IX04 471 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 PM20D2Q8IYS1 436 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 ENTHD1Q8IYW4 607 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 EXD3Q8N9H8 876 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 Q8NA96 180 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 OXGR1Q96P68 337 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 SRXN1Q9BYN0 137 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 PNPLA3Q9NST1 481 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 GRHPRQ9UBQ7 328 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 KLHL21Q9UJP4 597 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 MCTS1Q9ULC4 181 aaKnown RBP15.1■□□□□ 0.01
SNX1-203ENST00000558040 RNF6Q9Y252 685 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 NOX1Q9Y5S8 564 aa15.1■□□□□ 0.01
SNX1-203ENST00000558040 FRYQ5TBA9 3013 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 LOC102725191A0A1B0GVB3 256 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 OR14I1A6ND48 311 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 MS4A18H0YCH9 400 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 M0R3G1 203 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms