RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 EMDP50402 254 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 TPMTP51580 245 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 AP3M2P53677 418 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 PLOD1Q02809 727 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 FCHO2Q0JRZ9 810 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNF177Q13360 481 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 HSDL1Q3SXM5 330 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNF672Q499Z4 452 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 CTSL3PQ5NE16 218 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 CARD17Q5XLA6 110 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 OR2A2Q6IF42 318 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 PWWP2BQ6NUJ5 590 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 MOB3BQ86TA1 216 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 CCDC71Q8IV32 467 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 APLFQ8IW19 511 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 EID2Q8N6I1 236 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNF781Q8N8C0 355 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 Q8N9G6 341 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ZSCAN4Q8NAM6 433 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 C17orf47Q8NEP4 570 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 WFDC11Q8NEX6 87 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 OR1L4Q8NGR5 311 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 SPPL2AQ8TCT8 520 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNF75CPQ92670 426 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 NRGNQ92686 78 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 TCEAL4Q96EI5 215 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 MTMR9Q96QG7 549 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 CITED1Q99966 193 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ST6GALNAC5Q9BVH7 336 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 RBM4Q9BWF3 364 aaKnown RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 LRRN3Q9H3W5 708 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ELL3Q9HB65 397 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 DEPPQ9NTK1 212 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 PSME2Q9UL46 239 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 KIAA1257Q9ULG3 409 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 EXOGQ9Y2C4 368 aaKnown RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 FBXO7Q9Y3I1 522 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 TIMM10BQ9Y5J6 103 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ALG6Q9Y672 507 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 NAV1Q8NEY1 1877 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 PTPRDP23468 1912 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 NFASCO94856 1347 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 ARPC4-TTLL3A0A0A6YYG9 625 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 A0A1W2PNV4 684 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 NPIPA7E9PJI5 369 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 C11orf98E9PRG8 122 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 ABCD4O14678 606 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 RNF13O43567 381 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 DNAJB6O75190 326 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 NDUFB10O96000 172 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 SP1P08047 785 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 HBQ1P09105 142 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 NPIPA8P0DM63 369 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 CAPGP40121 348 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 SLC1A4P43007 532 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 SYKP43405 635 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 P2RY1P47900 373 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 CSNK1EP49674 416 aaKnown RBP4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 RPS6P62753 249 aaKnown RBP4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 OTUD4Q01804 1114 aaKnown RBP4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 BDH1Q02338 343 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 ENPEPQ07075 957 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 PPP1R7Q15435 360 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 UPP1Q16831 310 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 SNAI3Q3KNW1 292 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNF718Q3SXZ3 478 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 PRR30Q53SZ7 412 aaPredicted RBP4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 SEL1L2Q5TEA6 688 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 ANGPTL8Q6UXH0 198 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 C3P1Q6ZMU1 363 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 FRRS1Q6ZNA5 592 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 PRSS48Q7RTY5 328 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 MFSD9Q8NBP5 474 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 OR5L2Q8NGL0 311 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 KCNG3Q8TAE7 436 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 MRGPRDQ8TDS7 321 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 TBCKQ8TEA7 893 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 STARD8Q92502 1023 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 C10orf35Q96D05 121 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 ATXN7L3BQ96GX2 97 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 COPS8Q99627 209 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 FAM173AQ9BQD7 235 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 EXO5Q9H790 373 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 RPRD1BQ9NQG5 326 aaKnown RBP4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 IL36GQ9NZH8 169 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 THYN1Q9P016 225 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 PISDQ9UG56 409 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 NPIPA1Q9UND3 350 aa4.03□□□□□ -1.76
MTHFD1-216ENST00000557539 CHD3Q12873 2000 aaKnown RBP4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 STAB2Q8WWQ8 2551 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 HHLA1C9JL84 531 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 SLCO1B7G3V0H7 640 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 G3V4G9 280 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 WRBO00258 174 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 MSH4O15457 936 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 NUDT14O95848 222 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 LGALS2P05162 132 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 FCGR3AP08637 254 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 SNHG28P0DPA3 235 aa4.02□□□□□ -1.77
MTHFD1-216ENST00000557539 MMP11P24347 488 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms