RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 DEFB107AQ8IZN7 70 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 POMGNT2Q8NAT1 580 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF417Q8TAU3 575 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 GEMIN6Q8WXD5 167 aaKnown RBP9.44□□□□□ -0.9
LINC00239-201ENST00000556973 HIST1H2ACQ93077 130 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 S100PBPQ96BU1 408 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 ZC3HAV1LQ96H79 300 aaKnown RBP9.44□□□□□ -0.9
LINC00239-201ENST00000556973 PRRC1Q96M27 445 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 MOGAT1Q96PD6 335 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF385AQ96PM9 386 aaKnown RBP9.44□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF587Q96SQ5 575 aaPredicted RBP9.44□□□□□ -0.9
LINC00239-201ENST00000556973 NANSQ9NR45 359 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 SLC7A10Q9NS82 523 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 DCAF13Q9NV06 445 aaKnown RBP9.44□□□□□ -0.9
LINC00239-201ENST00000556973 SEC14L4Q9UDX3 406 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 MALT1Q9UDY8 824 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 A4GNTQ9UNA3 340 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 FREM1Q5H8C1 2179 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 CIB4A0PJX0 185 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 PLPP3O14495 311 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 LYZL6O75951 148 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 OR6A2O95222 327 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 CH25HO95992 272 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 HRGP04196 525 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 THBDP07204 575 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 T-ENOLP0DO92 83 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 COX5AP20674 150 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 CLDN17P56750 224 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 IL1RL1Q01638 556 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 ZP4Q12836 540 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 C1DQ13901 141 aaKnown RBP9.43□□□□□ -0.9
LINC00239-201ENST00000556973 TSC22D1Q15714 1073 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF74Q16587 644 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 TSPO2Q5TGU0 170 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 NIPAL3Q6P499 406 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 TRPM8Q7Z2W7 1104 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 ABHD12BQ7Z5M8 362 aaPredicted RBP9.43□□□□□ -0.9
LINC00239-201ENST00000556973 PXKQ7Z7A4 578 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 CYP4Z1Q86W10 505 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 CDC20BQ86Y33 519 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 UEVLDQ8IX04 471 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 ARHGAP24Q8N264 748 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF433Q8N7K0 673 aaPredicted RBP9.43□□□□□ -0.9
LINC00239-201ENST00000556973 FAM156AQ8NDB6 213 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 RBM15BQ8NDT2 890 aaKnown RBP9.43□□□□□ -0.9
LINC00239-201ENST00000556973 OR5J2Q8NH18 312 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 TMEM239Q8WW34 195 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 HSH2DQ96JZ2 352 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 MUS81Q96NY9 551 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 FNDC11Q9BVV2 318 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 C1orf21Q9H246 121 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 SLCO5A1Q9H2Y9 848 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 FKRPQ9H9S5 495 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 MEPEQ9NQ76 525 aaPredicted RBP9.43□□□□□ -0.9
LINC00239-201ENST00000556973 TAS2R16Q9NYV7 291 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 B3GAT1Q9P2W7 334 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 MAGEL2Q9UJ55 1249 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF229Q9UJW7 825 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 EDARQ9UNE0 448 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 NOX1Q9Y5S8 564 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 SNX13Q9Y5W8 968 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 PKDREJQ9NTG1 2253 aa9.43□□□□□ -0.9
LINC00239-201ENST00000556973 LRRN3E7EW58 273 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 PDLIM1O00151 329 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 KPNA4O00629 521 aaPredicted RBP9.42□□□□□ -0.9
LINC00239-201ENST00000556973 KLF4O43474 513 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 AKAP8O43823 692 aaKnown RBP9.42□□□□□ -0.9
LINC00239-201ENST00000556973 KRT33AO76009 404 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 ASAH2BP0C7U1 165 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 ADORA3P0DMS8 318 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 PTNP21246 168 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 AHCYP23526 432 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 MPGP29372 298 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 DNAJA1P31689 397 aaKnown RBP9.42□□□□□ -0.9
LINC00239-201ENST00000556973 MSX2P35548 267 aaPredicted RBP9.42□□□□□ -0.9
LINC00239-201ENST00000556973 YAP1P46937 504 aaKnown RBP9.42□□□□□ -0.9
LINC00239-201ENST00000556973 SELENOPP49908 381 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 TGFBR3Q03167 851 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 PUDPQ08623 228 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 TRAM2Q15035 370 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 TIMM23BQ5SRD1 257 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 C1QTNF12Q5T7M4 302 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 OR7E24Q6IFN5 339 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 NHLRC1Q6VVB1 395 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 RNF113BQ8IZP6 322 aaKnown RBP9.42□□□□□ -0.9
LINC00239-201ENST00000556973 LRRC17Q8N6Y2 441 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 TMEM255BQ8WV15 326 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 MUCL1Q96DR8 90 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 PYURFQ96I23 114 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 LINC00470Q9BZP3 86 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 NGBQ9NPG2 151 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 TAS2R5Q9NYW4 299 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 RCE1Q9Y256 329 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 MED31Q9Y3C7 131 aa9.42□□□□□ -0.9
LINC00239-201ENST00000556973 FAM32AQ9Y421 112 aaKnown RBP9.42□□□□□ -0.9
LINC00239-201ENST00000556973 OR5H1A6NKK0 313 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 ENO4A6NNW6 628 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 DEFB108AA8MXU0 73 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 J3KTA2 159 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 FFAR1O14842 300 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms