RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 LRRC8CQ8TDW0 803 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 SPDL1Q96EA4 605 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 OXGR1Q96P68 337 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 EBF4Q9BQW3 602 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 C12orf10Q9HB07 376 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 SLCO1B3Q9NPD5 702 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 CCDC167Q9P0B6 97 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 SEC14L4Q9UDX3 406 aa19.7■□□□□ 0.74
ACTN1-220ENST00000556433 A0A1B0GWA3 101 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 OR2T1O43869 369 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 F12P00748 615 aaPredicted RBP19.69■□□□□ 0.74
ACTN1-220ENST00000556433 CRYAAP02489 173 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 ARAFP10398 606 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 TUBA1BP68363 451 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 TUBA4AP68366 448 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 CDK6Q00534 326 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 ROR2Q01974 943 aaKnown RBP19.69■□□□□ 0.74
ACTN1-220ENST00000556433 C1DQ13901 141 aaKnown RBP19.69■□□□□ 0.74
ACTN1-220ENST00000556433 SWI5Q1ZZU3 235 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 PAGE3Q5JUK9 113 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 REEP3Q6NUK4 255 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 ANKRD16Q6P6B7 361 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 C6orf89Q6UWU4 347 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 TUBA1AQ71U36 451 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 CXXC5Q7LFL8 322 aaKnown RBP19.69■□□□□ 0.74
ACTN1-220ENST00000556433 LSMEM1Q8N8F7 131 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 MAGEE2Q8TD90 523 aaPredicted RBP19.69■□□□□ 0.74
ACTN1-220ENST00000556433 C10orf105Q8TEF2 133 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 NANOS1Q8WY41 292 aaKnown RBP19.69■□□□□ 0.74
ACTN1-220ENST00000556433 TAAR8Q969N4 342 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 CCDC28BQ9BUN5 200 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 PRR14Q9BWN1 585 aa19.69■□□□□ 0.74
ACTN1-220ENST00000556433 ATRQ13535 2644 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 ARPC4-TTLL3A0A0A6YYG9 625 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 SLC43A1O75387 559 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 LY6HO94772 140 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 HOXB1P14653 301 aaPredicted RBP19.68■□□□□ 0.74
ACTN1-220ENST00000556433 PPIBP23284 216 aaKnown RBP19.68■□□□□ 0.74
ACTN1-220ENST00000556433 HTR2AP28223 471 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 DHRS4L2Q6PKH6 230 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 KRT73Q86Y46 540 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 C10orf111Q8N326 155 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 PROX1Q92786 737 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 SLC38A4Q969I6 547 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 ZNF317Q96PQ6 595 aaPredicted RBP19.68■□□□□ 0.74
ACTN1-220ENST00000556433 KATNB1Q9BVA0 655 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 SPATA5L1Q9BVQ7 753 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 VAPAQ9P0L0 249 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 RCE1Q9Y256 329 aa19.68■□□□□ 0.74
ACTN1-220ENST00000556433 M0R082 166 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 AIM2O14862 343 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 TPST1O60507 370 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 ZNF432O94892 652 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 IFNA2P01563 188 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 CSF3P09919 207 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 SERPINF1P36955 418 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 SH3BGRP55822 239 aaPredicted RBP19.67■□□□□ 0.74
ACTN1-220ENST00000556433 ARF1P84077 181 aaKnown RBP19.67■□□□□ 0.74
ACTN1-220ENST00000556433 CHRFAM7AQ494W8 412 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 ALG10BQ5I7T1 473 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 C6orf52Q5T4I8 152 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 FAM69AQ5T7M9 428 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 C5orf46Q6UWT4 87 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 NET1Q7Z628 596 aaPredicted RBP19.67■□□□□ 0.74
ACTN1-220ENST00000556433 COMTD1Q86VU5 262 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 ZNF417Q8TAU3 575 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 DNAJA4Q8WW22 397 aaPredicted RBP19.67■□□□□ 0.74
ACTN1-220ENST00000556433 ZNF587Q96SQ5 575 aaPredicted RBP19.67■□□□□ 0.74
ACTN1-220ENST00000556433 NELFAQ9H3P2 528 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 SLC52A3Q9NQ40 469 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 CA10Q9NS85 328 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 B3GAT1Q9P2W7 334 aa19.67■□□□□ 0.74
ACTN1-220ENST00000556433 CRNNQ9UBG3 495 aaPredicted RBP19.67■□□□□ 0.74
ACTN1-220ENST00000556433 IGKV1D-42A0A075B6H8 117 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 TRAV36DV7A0A075B6V5 113 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 RPL36A-HNRNPH2H7BZ11 118 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 CECR9P0C854 216 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 CBLP22681 906 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 GRPRP30550 384 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 AQP5P55064 265 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 SNRPD2P62316 118 aaKnown RBP19.66■□□□□ 0.74
ACTN1-220ENST00000556433 VLDLRP98155 873 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 IL1RL1Q01638 556 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 NAAAQ02083 359 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 GLIPR1L2Q4G1C9 344 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 AGKQ53H12 422 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 PODNL1Q6PEZ8 512 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 ULK3Q6PHR2 472 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 H1FNTQ75WM6 255 aaPredicted RBP19.66■□□□□ 0.74
ACTN1-220ENST00000556433 GPR137CQ8N3F9 429 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 ANKK1Q8NFD2 765 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 SPATA3Q8NHX4 192 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 RNF217Q8TC41 542 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 GPR35Q9HC97 309 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 SELENONQ9NZV5 590 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 COL6A5A8TX70 2615 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 ARFGEF3Q5TH69 2177 aa19.66■□□□□ 0.74
ACTN1-220ENST00000556433 EVPLLA8MZ36 301 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 FZD7O75084 574 aa19.65■□□□□ 0.74
ACTN1-220ENST00000556433 USF1P22415 310 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms