RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 EGFL6Q8IUX8 553 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 ERI1Q8IV48 349 aaKnown RBP2.19□□□□□ -2.06
SCFD1-213ENST00000554776 NUDCD3Q8IVD9 361 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 MFSD6LQ8IWD5 586 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 PRR22Q8IZ63 422 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 TPRX1Q8N7U7 411 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 OR4F6Q8NGB9 312 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 KCNG3Q8TAE7 436 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 BRSK1Q8TDC3 778 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 C7orf33Q8WU49 177 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 FAM122AQ96E09 287 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 SMIM14Q96QK8 99 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CCDC77Q9BR77 488 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 BTNL2Q9UIR0 455 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CSDC2Q9Y534 153 aaKnown RBP2.19□□□□□ -2.06
SCFD1-213ENST00000554776 PPIAL4EA0A075B759 164 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 OR2AG2A6NM03 316 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 USP27XA6NNY8 438 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PPP1R2P9O14990 202 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 HDAC3O15379 428 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 RNF13O43567 381 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PSTPIP1O43586 416 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 DFNA5O60443 496 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 OR7A10O76100 309 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 C1orf105O95561 183 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 SERPIND1P05546 499 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 TPM2P07951 284 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PABPC4LP0CB38 370 aaKnown RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PPIAL4FP0DN26 164 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 TOP1P11387 765 aaKnown RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 FUT3P21217 361 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 KITLGP21583 273 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 CHMLP26374 656 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 IL12AP29459 219 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 EPS15P42566 896 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 KPNA2P52292 529 aaKnown RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 SUCLG1P53597 346 aaKnown RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 CCNA1P78396 465 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 IRX3P78415 501 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 TLE4Q04727 773 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 ACVR1Q04771 509 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 REG3AQ06141 175 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF763Q0D2J5 394 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 BST2Q10589 180 aaKnown RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 ASPHQ12797 758 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF77Q15935 545 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF79Q15937 498 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 SSX2Q16385 188 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 C1orf100Q5SVJ3 147 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 IL34Q6ZMJ4 242 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF620Q6ZNG0 422 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 RFLNAQ6ZTI6 216 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PRSS41Q7RTY9 318 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 THOC6Q86W42 341 aaKnown RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 RALGPS2Q86X27 583 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PSTKQ8IV42 348 aaKnown RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PIANPQ8IYJ0 282 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 SLC2A14Q8TDB8 520 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PYROXD1Q8WU10 500 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 ITCHQ96J02 903 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 B3GALT6Q96L58 329 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 MBOAT4Q96T53 435 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 HIST1H4GQ99525 98 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PKIBQ9C010 78 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 C20orf85Q9H1P6 137 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 ANKRA2Q9H9E1 313 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 NT5MQ9NPB1 228 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 GIN1Q9NXP7 522 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 SLC2A8Q9NY64 477 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 KCNIP1Q9NZI2 227 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 SPATA7Q9P0W8 599 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 DCDC2Q9UHG0 476 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 NAP1L2Q9ULW6 460 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 KANK1Q14678 1352 aa2.18□□□□□ -2.06
SCFD1-213ENST00000554776 PHF3Q92576 2039 aaKnown RBP2.18□□□□□ -2.06
SCFD1-213ENST00000554776 A0A0U1RQS6 177 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 HEATR9A2RTY3 570 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 TMEM110-MUSTN1A8MSY1 372 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 E9PBE3 544 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 SGK1O00141 431 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 LSM1O15116 133 aaKnown RBP2.17□□□□□ -2.06
SCFD1-213ENST00000554776 EMC8O43402 210 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 TMEM50AO95807 157 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 ACTL6AO96019 429 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 GIPP09681 153 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-213ENST00000554776 GABRR1P24046 479 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 FMO3P31513 532 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 RIPPLY3P57055 190 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 PLP1P60201 277 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 TGM3Q08188 693 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 ARFRP1Q13795 201 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 TGFBIQ15582 683 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 NSDHLQ15738 373 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 MRPL23Q16540 153 aaKnown RBP2.17□□□□□ -2.06
SCFD1-213ENST00000554776 GPR157Q5UAW9 335 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 RSBN1Q5VWQ0 802 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-213ENST00000554776 GDPD3Q7L5L3 318 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 NIPA1Q7RTP0 329 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF546Q86UE3 836 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 PAQR7Q86WK9 346 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms