RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ELOVL1Q9BW60 279 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PITPNM3Q9BZ71 974 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SLC39A8Q9C0K1 460 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TKTL2Q9H0I9 626 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 VCXQ9H320 206 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ELOVL3Q9HB03 270 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PLEKHA1Q9HB21 404 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 C20orf141Q9NUB4 165 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 LIN7CQ9NUP9 197 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SIDT1Q9NXL6 827 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 COA4Q9NYJ1 87 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PLEK2Q9NYT0 353 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FOXJ2Q9P0K8 574 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 GSKIPQ9P0R6 139 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 KLQ9UEF7 1012 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 NXT1Q9UKK6 140 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 GOLT1BQ9Y3E0 138 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 B3GALT1Q9Y5Z6 326 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ASXL3Q9C0F0 2248 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 NPIPA5A0A0B4J1W7 369 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 GAGE10A6NGK3 116 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 LILRA5A6NI73 299 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 PRSS29PA6NIE9 313 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 C2CD4BA6NLJ0 364 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 NPIPA5E9PKD4 350 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 NPIPA3F8WFD2 350 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 H3BNX3 289 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 MKRN2OSH3BPM6 223 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 RFXANKO14593 260 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 SNX3O60493 162 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 CPNE6O95741 557 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 PAK4O96013 591 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 SERPINA1P01009 418 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 IFNA5P01569 189 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 AMY1AP04745 511 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 CD5P06127 495 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 CTSBP07858 339 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 LINC00614P0C842 121 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 OCMP0CE72 109 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF44P15621 663 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 WT1P19544 449 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ANXA7P20073 488 aaKnown RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ZP3P21754 424 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 CA4P22748 312 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ACKR3P25106 362 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 KDELR2P33947 212 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 RPA3P35244 121 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 BCL6P41182 706 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ETV4P43268 484 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 IDH2P48735 452 aaKnown RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 RGS6P49758 472 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 CCR6P51684 374 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 PJVKQ0ZLH3 352 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 MGAT2Q10469 447 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 KLRB1Q12918 225 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 SLC17A1Q14916 467 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 KPNB1Q14974 876 aaKnown RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 MICBQ29980 383 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 DEFB133Q30KQ1 61 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 PRAMEF17Q5VTA0 474 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 CGB2Q6NT52 195 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 PNCKQ6P2M8 343 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 CYHR1Q6ZMK1 362 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 MBOAT1Q6ZNC8 495 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 Q6ZNX1 250 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ZCCHC23Q6ZST2 131 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 B3GNT8Q7Z7M8 397 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 NT5DC3Q86UY8 548 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 C17orf78Q8N4C9 275 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 C2orf73Q8N5S3 287 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 PRELID2Q8N945 189 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 Q8NA96 180 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM35BQ8NCS4 154 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ABHD11Q8NFV4 315 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 OR56A4Q8NGH8 313 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ASB11Q8WXH4 323 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 HOXB13Q92826 284 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 CDS1Q92903 461 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 PIGTQ969N2 578 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 CCDC120Q96HB5 630 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 COX14Q96I36 57 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 MARK4Q96L34 752 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 MCCC1Q96RQ3 725 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 VAT1Q99536 393 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 TEAD3Q99594 435 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 NUDT9Q9BW91 350 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 SLC19A3Q9BZV2 496 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 SPNS1Q9H2V7 528 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 TCEAL2Q9H3H9 227 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 KCNK15Q9H427 330 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 WDR54Q9H977 334 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 DUSP22Q9NRW4 184 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 C1GALT1Q9NS00 363 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ACSS1Q9NUB1 689 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF701Q9NV72 531 aaPredicted RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 SLC2A8Q9NY64 477 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 MRTO4Q9UKD2 239 aaKnown RBP2.46□□□□□ -2.01
PRPF39-206ENST00000554429 PILRAQ9UKJ1 303 aa2.46□□□□□ -2.01
PRPF39-206ENST00000554429 NPIPA1Q9UND3 350 aa2.46□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms