RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ARMC7Q9H6L4 198 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 ANGPT4Q9Y264 503 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 SETD2Q9BYW2 2564 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-206ENST00000553529 MS4A18H0YCH9 400 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 SERPINI2O75830 405 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 CELA3BP08861 270 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 FOSL1P15407 271 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 PAX1P15863 534 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 MPGP29372 298 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 MAP2K6P52564 334 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 IRX1P78414 480 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-206ENST00000553529 KLF10Q13118 480 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 MS4A18Q3C1V0 323 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 SLC22A25Q6T423 547 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 NET1Q7Z628 596 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-206ENST00000553529 KRT73Q86Y46 540 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 C11orf65Q8NCR3 313 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 OR1K1Q8NGR3 316 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 STON2Q8WXE9 905 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 TXNDC15Q96J42 360 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 RABEP2Q9H5N1 569 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 CXorf56Q9H5V9 222 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 NGBQ9NPG2 151 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 ARMCX1Q9P291 453 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 B3GALT5Q9Y2C3 310 aa15.93■□□□□ 0.14
SHMT2-206ENST00000553529 A0A087WUJ7 227 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 KPNA4O00629 521 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-206ENST00000553529 TRAF3IP2O43734 574 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-206ENST00000553529 LY6HO94772 140 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 ZNF432O94892 652 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 IL1RL1Q01638 556 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 KRTAP1-1Q07627 177 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 NRF1Q16656 503 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 TBRG1Q3YBR2 411 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 NANOGP8Q6NSW7 305 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 BIVMQ86UB2 503 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 SNX32Q86XE0 403 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 POU5F2Q8N7G0 328 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 SLC38A4Q969I6 547 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 MCHR1Q99705 422 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 NANOGQ9H9S0 305 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 SAR1AQ9NR31 198 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 TMEM45AQ9NWC5 275 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 PARPBPQ9NWS1 579 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 MED29Q9NX70 200 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 TESQ9UGI8 421 aaKnown RBP15.92■□□□□ 0.14
SHMT2-206ENST00000553529 TRIM33Q9UPN9 1127 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 MOKQ9UQ07 419 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 CR1P17927 2039 aa15.92■□□□□ 0.14
SHMT2-206ENST00000553529 TRAV36DV7A0A075B6V5 113 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 IGHV1-18A0A0C4DH31 117 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 LOC100653049A0A140TA62 436 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 RNF223E7ERA6 249 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 FZD7O75084 574 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 KRT34O76011 436 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 VIMP08670 466 aaKnown RBP15.91■□□□□ 0.14
SHMT2-206ENST00000553529 PCGF2P35227 344 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 ARFIP2P53365 341 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 NCALDP61601 193 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 ROR2Q01974 943 aaKnown RBP15.91■□□□□ 0.14
SHMT2-206ENST00000553529 ZSWIM7Q19AV6 140 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 CLEC12BQ2HXU8 276 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 ENTPD8Q5MY95 495 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 C11orf71Q6IPW1 123 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 ULK3Q6PHR2 472 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 P2RY8Q86VZ1 359 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 LRRC17Q8N6Y2 441 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 BCL2L2Q92843 193 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-206ENST00000553529 SLC35B4Q969S0 331 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 RADILQ96JH8 1075 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 ZNF607Q96SK3 696 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 SPATA5L1Q9BVQ7 753 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 NOX3Q9HBY0 568 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 POU2F3Q9UKI9 436 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 CORO2BQ9UQ03 480 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 RASD1Q9Y272 281 aa15.91■□□□□ 0.14
SHMT2-206ENST00000553529 ANK3Q12955 4377 aaKnown RBP15.91■□□□□ 0.14
SHMT2-206ENST00000553529 MRASO14807 208 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 KRT33AO76009 404 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 GTF2E2P29084 291 aaKnown RBP15.9■□□□□ 0.14
SHMT2-206ENST00000553529 ARF1P84077 181 aaKnown RBP15.9■□□□□ 0.14
SHMT2-206ENST00000553529 VEZF1Q14119 521 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 TRMT5Q32P41 509 aaKnown RBP15.9■□□□□ 0.14
SHMT2-206ENST00000553529 FAM69AQ5T7M9 428 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 OR7E24Q6IFN5 339 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 PRSS57Q6UWY2 283 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 TMEM108Q6UXF1 575 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 NHLRC1Q6VVB1 395 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 DTX2Q86UW9 622 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 CALHM3Q86XJ0 350 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 TMEM123Q8N131 208 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 LRRC58Q96CX6 371 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 OXGR1Q96P68 337 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 OR2M2Q96R28 347 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 CACNG6Q9BXT2 260 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 TMEM27Q9HBJ8 222 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 ATP23Q9Y6H3 246 aa15.9■□□□□ 0.14
SHMT2-206ENST00000553529 PRORSD1PA6NEY8 169 aa15.89■□□□□ 0.13
SHMT2-206ENST00000553529 ZNF587BE7ETH6 402 aa15.89■□□□□ 0.13
SHMT2-206ENST00000553529 C11orf98E9PRG8 122 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms